Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., histidyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  360 bits (925), Expect = e-104
 Identities = 204/419 (48%), Positives = 264/419 (63%), Gaps = 12/419 (2%)

Query: 5   IQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVTDVVE 64
           I  I+G  D  P +S ++ ++E V + V   YG+ E+R PI+E T LF R+IG  TDVV+
Sbjct: 4   ITKIKGFADLFPPESDVFTRMESVARQVFGRYGFVELRTPILERTDLFCRSIGTETDVVQ 63

Query: 65  KEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQE--QRLWYMGPMFRHERPQKGRY 122
           KEMYTF DR   SLT+RPE TAG +R+ IE+G  + QE   +L+  GPMFR+ERPQKGR 
Sbjct: 64  KEMYTFPDRKDRSLTMRPEATAGVMRAYIESGR-HTQEPVSKLFTSGPMFRYERPQKGRM 122

Query: 123 RQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTALI 182
           RQFHQ   EV G   P  DAEL++M  R   ELG+   + L++NS+G  E R  YR AL 
Sbjct: 123 RQFHQINCEVLGPVEPHADAELVLMLMRFLTELGLTG-LSLQINSLGCKECRPLYRKALS 181

Query: 183 DYLEQYQNV-LDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAESKQHFAGLC 241
           D+L    N  L EDC+RRM TNPLRVLD K P  + +  +AP + ++   E + HF  + 
Sbjct: 182 DFLASIDNAALCEDCRRRMETNPLRVLDCKVPGCRELTANAPTILEHNCPECRTHFDAVL 241

Query: 242 ELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKPTP 301
            +LD+  + Y +N RLVRGLDYYNRT FE +++S+GSQG+V GGGRYDGL+ QLGG   P
Sbjct: 242 RILDSRNVPYVLNDRLVRGLDYYNRTTFEVVSDSIGSQGSVAGGGRYDGLISQLGGPDVP 301

Query: 302 AVGFAMGLERLVLMMETLGNTDVRRSVDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVMT 361
            VGFA G+ERL LMM      D  R    ++         A + LAE LR Q  GL    
Sbjct: 302 GVGFACGMERLALMMP---GADAPRP-HFHVAVLDPAAQDAALLLAEDLRAQ--GLTGSV 355

Query: 362 HFGGGNFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQ-AEVAKLLA 419
            FG G+ K + + A K GA   L+LG DE+AA TVVVKD+  GEQ T+ + A  A+LLA
Sbjct: 356 GFGAGSIKSRMRLAGKSGARACLILGGDELAAGTVVVKDMDSGEQETIGRDAVAARLLA 414