Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  516 bits (1329), Expect = e-151
 Identities = 266/358 (74%), Positives = 304/358 (84%), Gaps = 2/358 (0%)

Query: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62
           M  ESPIKRR S +I+VG+VP+G  APIAVQSMTN+ T DVAATVAQI  LE  G DIVR
Sbjct: 1   MHGESPIKRRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVR 60

Query: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122
           VSVP M+AAEAF  IKQ V VPLVADIHFDYRIAL+VAE GVDCLRINPGNIG E R+R+
Sbjct: 61  VSVPDMDAAEAFGKIKQLVKVPLVADIHFDYRIALRVAELGVDCLRINPGNIGREDRVRA 120

Query: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182
           VVD ARD+GIPIRIGVN GSLEKDLQ KYGEPTP ALVESA+RHV+ L+RLNF  FKVSV
Sbjct: 121 VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESALRHVEHLERLNFQDFKVSV 180

Query: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242
           KASDVF+AV++YRLLAK+I QPLHLGITEAGG R+G+VKSAVGLGMLLAEGIGDT+RISL
Sbjct: 181 KASDVFMAVEAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL 240

Query: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302
           AADPVEE+KVG+DILKSL +RSRGINFIACPSCSRQ FDV+ T+N LE RLED+L P+DV
Sbjct: 241 AADPVEEVKVGYDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDV 300

Query: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAA 360
           ++IGCVVNGPGEA+ +H+GL G    +  Y DG +  ++  ND+LV +LE  IR KAA
Sbjct: 301 AVIGCVVNGPGEAKEAHIGLTGGT-PNLIYIDG-KPSQKLTNDNLVDELERLIRQKAA 356