Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Pseudomonas stutzeri RCH2

 Score =  521 bits (1341), Expect = e-152
 Identities = 264/358 (73%), Positives = 308/358 (86%), Gaps = 1/358 (0%)

Query: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62
           M  ESPIKRR S +I+VG VP+G  API+VQSMTNT T DV ATVAQI+ L   GADIVR
Sbjct: 1   MHSESPIKRRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVR 60

Query: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122
           VSVP+MEAAEAF  IK+ V +PLVADIHFDY+IAL+VAE GVDCLRINPGNIG E R+R+
Sbjct: 61  VSVPSMEAAEAFGRIKRLVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGREDRVRA 120

Query: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182
           VVD ARDKGIPIRIGVN GSLEKDLQ KYGEPTP+ALVESA+RHVD LDRL+F  FKVSV
Sbjct: 121 VVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESALRHVDHLDRLDFQDFKVSV 180

Query: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242
           KASDVF+AV++YRLLA +I+QPLHLGITEAGG R+G+VKSAVGLGMLLA+GIGDT+R+SL
Sbjct: 181 KASDVFMAVEAYRLLAGQIEQPLHLGITEAGGLRSGTVKSAVGLGMLLADGIGDTIRVSL 240

Query: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302
           AADPVEEIKVGFDILKSLR+RSRGINFIACPSCSRQ FDV+ T+N LE R+ED+L PMDV
Sbjct: 241 AADPVEEIKVGFDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEARVEDLLVPMDV 300

Query: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAA 360
           ++IGCVVNGPGEA+ +H+GL G +  +  Y DG +  ++ +N++LV +LE  IR KAA
Sbjct: 301 AVIGCVVNGPGEAKEAHVGLTGGSPNNLVYIDG-KPAQKLNNENLVDELEQLIRRKAA 357