Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas syringae pv. syringae B728a

 Score =  516 bits (1328), Expect = e-151
 Identities = 268/362 (74%), Positives = 304/362 (83%), Gaps = 2/362 (0%)

Query: 3   MQHESPIKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVR 62
           M  ESPIKRR S +I+VG VP+G  APIAVQSMTN+ T DVAATVAQI  LE  G DIVR
Sbjct: 1   MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVR 60

Query: 63  VSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRS 122
           VSVP M+AAEAF  IKQ V VPLVADIHFD+RIAL+VAE GVDCLRINPGNIG E R+R+
Sbjct: 61  VSVPDMDAAEAFGRIKQLVKVPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRA 120

Query: 123 VVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSV 182
           VVD ARD+GIPIRIGVN GSLEKDLQ KYGEPTPEALVESA+RHV+ L RLNF  FKVSV
Sbjct: 121 VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESALRHVEHLQRLNFQDFKVSV 180

Query: 183 KASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISL 242
           KASDVF+AV +YRLLAK+I QPLHLGITEAGG R+G+VKSAVGLGMLLAEGIGDT+RISL
Sbjct: 181 KASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL 240

Query: 243 AADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDV 302
           AADPVEE+KVG+DILKSLR+RSRGINFIACPSCSRQ FDV+ T+N LE RLED+L P+DV
Sbjct: 241 AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDV 300

Query: 303 SIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362
           ++IGCVVNGPGEA+ +H+GL G    +  Y DG +  ++  ND+LV +LE  IR KAA  
Sbjct: 301 AVIGCVVNGPGEAKEAHIGLTGGT-PNLIYIDG-KPAQKLTNDNLVNELERLIREKAAEK 358

Query: 363 DE 364
            E
Sbjct: 359 AE 360