Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG from Phaeobacter inhibens DSM 17395

 Score =  402 bits (1034), Expect = e-117
 Identities = 208/366 (56%), Positives = 268/366 (73%), Gaps = 3/366 (0%)

Query: 1   MSMQHESP---IKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVG 57
           MS+ H  P   I+RR S +I+VG+VP+G  APIAVQ+MTNT TTDVAATVAQ+++  + G
Sbjct: 1   MSINHIRPWRHIERRKSRQIHVGNVPVGGDAPIAVQTMTNTPTTDVAATVAQVQAAAEAG 60

Query: 58  ADIVRVSVPTMEAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNE 117
           ADIVRVSVP   +++A K I ++  VP+VADIHF Y+  ++ AE G  CLRINPGNIG+E
Sbjct: 61  ADIVRVSVPDEASSKALKEIVRESPVPIVADIHFHYKRGIEAAEAGAACLRINPGNIGDE 120

Query: 118 ARIRSVVDCARDKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQ 177
            R+  V+  A+D    IRIGVN GSLEK L  KYGEP PEA+VES + H+ IL   +F +
Sbjct: 121 KRVAEVIRAAKDHNCSIRIGVNAGSLEKHLLDKYGEPCPEAMVESGLDHIRILQDHDFHE 180

Query: 178 FKVSVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDT 237
           FK+SVKASDVF++  +Y+ LA+  D P+HLGITEAGG  +G++KSA+GLG LL  GIGDT
Sbjct: 181 FKISVKASDVFMSAAAYQQLAEATDAPIHLGITEAGGFVSGTIKSAIGLGQLLWMGIGDT 240

Query: 238 LRISLAADPVEEIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVL 297
           LR+SL+ADPVEE+KVGF+ILKSL +R RG+N I+CPSC+RQ FDVI TV ALE+RLE V 
Sbjct: 241 LRVSLSADPVEEVKVGFEILKSLGLRHRGVNIISCPSCARQGFDVIKTVEALEKRLEHVK 300

Query: 298 TPMDVSIIGCVVNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRA 357
           TPM +SIIGCVVNGPGEA ++ +G  G    S       +   +  N  +V  +  ++  
Sbjct: 301 TPMSLSIIGCVVNGPGEALMTDVGFTGGGAGSGMVYLAGKASHKMSNAQMVDHIVEEVEK 360

Query: 358 KAARLD 363
           KAA+LD
Sbjct: 361 KAAQLD 366