Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Dechlorosoma suillum PS

 Score =  179 bits (453), Expect = 2e-49
 Identities = 135/404 (33%), Positives = 212/404 (52%), Gaps = 57/404 (14%)

Query: 9   IKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTM 68
           I RRP+  + VG V IG  AP+ VQSMTNT T D  AT  Q   L + G+++VR++V T 
Sbjct: 7   IPRRPTLGVKVGGVTIGGDAPVVVQSMTNTDTEDYLATALQTAELARAGSELVRITVNTP 66

Query: 69  EAAEAFKLIKQQ-----VSVPLVADIHFD-YRI-------ALKVAEYGVDCLRINPGNIG 115
           EAA A   I++      +SVPL+ D H++ +R+       A  +A+Y     RINPGN+G
Sbjct: 67  EAAAAVPKIREHLDRLGLSVPLIGDFHYNGHRLLTDHPECAQALAKY-----RINPGNVG 121

Query: 116 N----EARIRSVVDCARDKGIPIRIGVNGGSLEKDLQLKYGE-----PTP--------EA 158
           +    + +   +++ A     P+RIGVN GSL++DL  +  +     P P        EA
Sbjct: 122 HGKKRDEQFAQMIELACKYDKPVRIGVNWGSLDQDLLARIMDENAKRPEPKDAVQIMREA 181

Query: 159 LVESAMRHVD--ILDRLNFDQFKVSVKASDVFLAVDSYRLLAKKIDQPLHLGITEAGGAR 216
           +V SA+   +  +   L  D   +S K S V   +  YR L+ +    LHLG+TEAG   
Sbjct: 182 MVTSALESAEKAVEIGLPADHIVLSCKVSGVQDLIAIYRELSARSRFALHLGLTEAGMGS 241

Query: 217 AGSVKSAVGLGMLLAEGIGDTLRISLAADP----VEEIKVGFDILKSLRIRSRGINFIAC 272
            G V S   +G+LL EGIGDT+R+SL  +P      E+ V  ++L+++ +R+      AC
Sbjct: 242 KGIVASTAAMGVLLQEGIGDTIRVSLTPEPGGKRTGEVIVAQEMLQTMGLRAFTPMVAAC 301

Query: 273 PSCSRQEF----DVIGTVNAL------EQRLE-DVLTPMDVSIIGCVVNGPGEAEVSHLG 321
           P C R       ++  T+         + R E D +  M ++++GCVVNGPGE++ +++G
Sbjct: 302 PGCGRTTSTFFQELASTIQEYVRAQMPQWRTEYDGVENMTLAVMGCVVNGPGESKHANIG 361

Query: 322 LA----GSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAAR 361
           ++    G    +  +EDG  +      D++  + +A +    AR
Sbjct: 362 ISLPGTGEVPAAPVFEDG-EKTVTLRGDNIAEEFKAIVDRYVAR 404