Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  325 bits (834), Expect = 9e-94
 Identities = 167/327 (51%), Positives = 222/327 (67%)

Query: 9   IKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTM 68
           I+RR +  + +G V IG   P+ VQSM NT T DV ATV QI++L  VG ++VR++V   
Sbjct: 3   IERRRTREVRIGSVRIGGDNPVVVQSMANTDTRDVDATVGQIRALAAVGCEVVRLAVLNE 62

Query: 69  EAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSVVDCAR 128
            AA A   I+    VPLVADIHFD+R+A+   E GVD LRINPGNIG EA +  VVD AR
Sbjct: 63  AAAAAIGPIRAASPVPLVADIHFDHRLAVAALEAGVDALRINPGNIGGEANVARVVDAAR 122

Query: 129 DKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSVKASDVF 188
            +G  IR+GVN GS+EK L  ++G PTPEA+VESA+ HV +L+   F   K+S+K+S V 
Sbjct: 123 ARGACIRVGVNSGSVEKHLLERFGGPTPEAMVESALGHVRMLEDRGFGDIKISLKSSSVL 182

Query: 189 LAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISLAADPVE 248
             +D+YR+LA++ D PLH+G+TEAG    GSVKS+VGLG+LL  GIGDTLR+SL +DPVE
Sbjct: 183 HTIDAYRVLAERCDYPLHIGVTEAGTMLRGSVKSSVGLGVLLWLGIGDTLRVSLTSDPVE 242

Query: 249 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDVSIIGCV 308
           EI V ++IL+SL +R RG   I+CP+C R E  +I     +E+RL        V+++GC 
Sbjct: 243 EIPVAWEILRSLGLRHRGPEIISCPTCGRTEIGLISLAQEVERRLAGETENFKVAVMGCA 302

Query: 309 VNGPGEAEVSHLGLAGSNKKSAFYEDG 335
           VNGPGEA  + +G+AG   K   +  G
Sbjct: 303 VNGPGEAREADIGIAGGRDKGIIFRKG 329