Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  338 bits (867), Expect = 1e-97
 Identities = 174/327 (53%), Positives = 226/327 (69%)

Query: 9   IKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTM 68
           I+R+ +  + +G V IG   P+ VQSMTNT T DV  TV QI+ L++ G +IVR++V   
Sbjct: 3   IQRKQTREVRIGKVRIGGANPVVVQSMTNTDTRDVEQTVEQIRQLQEAGCEIVRLAVLNE 62

Query: 69  EAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSVVDCAR 128
           +AA A K I+ QVSVPLVADIHFD+R+A+   E GVD LRINPGNIG  A +  VVD A+
Sbjct: 63  DAAWAIKPIRSQVSVPLVADIHFDHRLAVSALEAGVDALRINPGNIGTRAAVDRVVDAAK 122

Query: 129 DKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSVKASDVF 188
                IRIGVN GSLE DL  +YG PTPEA+VESA RH+ +L+  NF   KVS+K+S V 
Sbjct: 123 AHNAVIRIGVNSGSLETDLIDQYGGPTPEAMVESAFRHIRMLEDRNFGDIKVSLKSSSVS 182

Query: 189 LAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISLAADPVE 248
             +++Y LL+ K D PLH+G+TEAG    GS+KSAVGLG+LL +GIGDTLR+SL +DPV 
Sbjct: 183 RCIEAYTLLSAKCDYPLHIGVTEAGTVLRGSIKSAVGLGVLLWQGIGDTLRVSLTSDPVA 242

Query: 249 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDVSIIGCV 308
           E+ V ++IL+SL +RSRG   IACP+C R E  +I     +E+RLE       V+++GCV
Sbjct: 243 EMAVAWEILRSLGLRSRGPEIIACPTCGRCEIGLIALAEEVERRLEGETESFKVAVMGCV 302

Query: 309 VNGPGEAEVSHLGLAGSNKKSAFYEDG 335
           VNGPGEA  + LG+AG   K   +  G
Sbjct: 303 VNGPGEAREADLGIAGGRDKGIIFRKG 329