Pairwise Alignments

Query, 376 a.a., flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Caulobacter crescentus NA1000

 Score =  393 bits (1009), Expect = e-114
 Identities = 199/354 (56%), Positives = 255/354 (72%)

Query: 9   IKRRPSTRIYVGDVPIGDGAPIAVQSMTNTRTTDVAATVAQIKSLEKVGADIVRVSVPTM 68
           I RR S +I VG V +G  API+VQSMTNT T+D AAT+ QI+ LE+ GADIVRVS P +
Sbjct: 14  ITRRQSRKIRVGSVEVGGDAPISVQSMTNTLTSDAAATLEQIRQLEEAGADIVRVSCPDV 73

Query: 69  EAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEARIRSVVDCAR 128
           E+  AFK I ++  VPLVADIHF Y+  ++ A+ G  CLRINPGNIG+  R+R V+  AR
Sbjct: 74  ESTAAFKTIAREAKVPLVADIHFHYKRGIEAAQAGAACLRINPGNIGSPDRVRDVIQAAR 133

Query: 129 DKGIPIRIGVNGGSLEKDLQLKYGEPTPEALVESAMRHVDILDRLNFDQFKVSVKASDVF 188
           D G  +RIGVN GSLE++L  KYGEP P+A+VESA+ H  IL   +F +FK+SVKASD F
Sbjct: 134 DHGCSMRIGVNAGSLERELLEKYGEPCPDAMVESALNHARILQDHDFHEFKISVKASDPF 193

Query: 189 LAVDSYRLLAKKIDQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISLAADPVE 248
           + V +Y  LA+ ID PLHLG+TEAG  R G+VKSA+G+G +L  GIGDT+R+SLAADPVE
Sbjct: 194 MTVAAYYQLAEAIDCPLHLGVTEAGATRTGTVKSAIGIGAMLWAGIGDTIRVSLAADPVE 253

Query: 249 EIKVGFDILKSLRIRSRGINFIACPSCSRQEFDVIGTVNALEQRLEDVLTPMDVSIIGCV 308
           EIKVGFDILKSL +R RG+N IACPSC+RQ F+VI TV ALE+RL  + TPM +SIIGCV
Sbjct: 254 EIKVGFDILKSLGLRHRGVNIIACPSCARQGFNVIKTVEALEERLAHISTPMSLSIIGCV 313

Query: 309 VNGPGEAEVSHLGLAGSNKKSAFYEDGVRQKERFDNDDLVAQLEAKIRAKAARL 362
           VNGPGEA ++ +G  G    +       +   +  N+ ++  +   +  KAA +
Sbjct: 314 VNGPGEALMTDIGFTGGGAGAGMVYMAGKPDHKQSNEGMIDHIVDLVEKKAAEI 367