Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., FIG021952: putative membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (363), Expect = 3e-39
 Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 37/352 (10%)

Query: 21  AIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSY 80
           A  +V PG  L+Q RE  G +  ++A +L L ++ + ++E   F+     TF RGY+R+Y
Sbjct: 10  AATRVNPGETLRQARESNGWSLAEVALKLNLTVASLGNLEAGAFDKLPGHTFARGYIRAY 69

Query: 81  AKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSK-KTKRQLHDSRIMLITWVILAVIVGM 139
           AK +G+ ++ ++  FD  Y        ++ S  + +   ++  + + +++ ++L  ++G 
Sbjct: 70  AKLLGMDQTVLVQQFDQ-YTGSDAQGSNVHSLGRIEEPVRVSHTILRIVSLLLLIAVIGG 128

Query: 140 STLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDASLANEDFAT-VPPLNELQDAAPASE 198
             +WW    Q  + + +K  +A        +     +   D  T + PL+E +D A    
Sbjct: 129 GFVWW----QDQASLRNKEPVA-------MNPEHVEVEGADGTTQIHPLDEPEDQAVVEG 177

Query: 199 EA--------PMSQESLSGEASELTPPAPNEADVVTDKPVVEETAAAPVAPAQPQGQTPV 250
           +A        P  QE+ +   +E   PAP         PV     AAP+A A     TP 
Sbjct: 178 QAEGETALALPQDQEANAEAGAEPAAPAP--------APVAPAAPAAPIATAPAAPSTP- 228

Query: 251 QSQAPVAAAPVTQPE-AAPSAPSQPVSSSTESASA--LLVMNFSADCWIQVKDATGKTLS 307
              AP AAAP T    AAP  P+ P + +   A+    + + F ADCW Q+ D  GK L 
Sbjct: 229 ---APTAAAPATHAAPAAPVVPAAPAAPTPAPAAGEGQVQIQFVADCWTQITDGNGKVLF 285

Query: 308 TGVKKAGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTL 359
           +G+K+ G S +++G+ P+ + LG   G  ++   +PVD++ +TSG+ ARL L
Sbjct: 286 SGLKRKGDSTAVNGKPPFAVRLGYARGAQVSYNGQPVDIAPFTSGETARLKL 337