Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., FIG021952: putative membrane protein from Pseudomonas fluorescens FW300-N1B4

 Score =  146 bits (369), Expect = 7e-40
 Identities = 100/349 (28%), Positives = 174/349 (49%), Gaps = 24/349 (6%)

Query: 21  AIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSY 80
           A  +V PG  L+Q RE  G +  ++A +L L ++ + ++E   F+     TF RGY+R+Y
Sbjct: 10  AANRVNPGETLRQARESNGWSLAEVALKLNLTINSLSNLEAGAFDKLPGHTFARGYIRAY 69

Query: 81  AKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITWVILAVIVGMS 140
           AK +G+ ++ ++  FD S     +          +   ++  + + +++ ++L  ++G  
Sbjct: 70  AKLLGMDQTVLVQQFDQSTGTDSQGSNVHSLGRIEEPVRVSHTILRIVSLLLLLAVIGGG 129

Query: 141 TLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDASLANEDFATVPPLNELQDAAPASEEA 200
            +WW    Q +    D   +AP  + +++ ++  +        + PL+E +D A A  +A
Sbjct: 130 FIWW--QDQTSLRTKDLIGLAPEHV-EVEGADGTT-------QIHPLDEPEDQAVAQGQA 179

Query: 201 ----PMS---QESLSGEASELTPPAPNEADVV---TDKPVVEETAAAPVAPAQPQGQTPV 250
               P++    ES + E       AP  A VV   T       TA A   PA P    P 
Sbjct: 180 EGETPLALPQAESSTEEPVNAETSAPVPAPVVSAVTPAAAAHSTAPAVATPATPATPAPA 239

Query: 251 QSQAPVAAAPVTQPEAAPSAPSQPVSSSTESASALLVMNFSADCWIQVKDATGKTLSTGV 310
               P   APV     AP+AP+ P  ++  +    + + F+ADCW QV D TGK L +G+
Sbjct: 240 ---VPAVPAPVISAPIAPTAPA-PAPAAPVAGQGQVQLQFTADCWTQVTDGTGKVLLSGL 295

Query: 311 KKAGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTL 359
           K+ G++VS+SG+ P+ + LG   G  ++   + VD++ +TSG+ ARL L
Sbjct: 296 KRKGENVSVSGKPPFSVRLGFARGAQVSYNGQVVDVAPFTSGETARLKL 344