Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

 Score =  142 bits (357), Expect = 2e-38
 Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 36/349 (10%)

Query: 21  AIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSY 80
           A  +V PG  L+Q RE    +   +A RL L ++ + ++E  +FE     TF RGY+R+Y
Sbjct: 10  ATNRVNPGETLRQARESRSWSLPDVALRLNLTVTSLTNLENGQFEKLPGHTFARGYVRAY 69

Query: 81  AKAVGIRESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITWVILAVIVGMS 140
           AK + + ++ ++  FD       +          +   +L  + + +++ ++L ++VG  
Sbjct: 70  AKLLDLDQAALVEQFDQFTGTDGKGSSVHALGRIEEPVRLSHNILRIVSLLLLVILVGGG 129

Query: 141 TLWWWQNSQKNSLIPDKTTIAPSAISDIQSSNDASLANEDFATVPPLNELQDAAPASEEA 200
             WW           D+ T+     S +   +    + +    + PL+E ++  PA  E 
Sbjct: 130 FFWW----------QDQATLRGKDQSGLNMEHVEVESADGTTQIHPLDEPEE--PAVAET 177

Query: 201 PMSQESLSGEASELTPPAPNEADVVTDKPVVEETAAAPVAPAQP-QGQTPVQSQAPVAAA 259
           P S ++                 + T  P  E  AAAP APA    G    Q Q P AA 
Sbjct: 178 PASGQT--------------SLPLNTGAPASEAPAAAPAAPASSVTGHATAQPQTPAAAT 223

Query: 260 PVTQ----PEAAPSAPSQPVSSSTESASAL-----LVMNFSADCWIQVKDATGKTLSTGV 310
           P       P AAP+ PS P + + + A  +     + + F ADCW QV D  GK L +G+
Sbjct: 224 PPASAPQAPVAAPNVPSMPTAPAEQPAPVVAGAGQVTVQFVADCWTQVTDGNGKVLVSGL 283

Query: 311 KKAGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTL 359
           K+ G+S+ ++G+ P  L LG   G  ++   +PVD++ +TSG+ ARL L
Sbjct: 284 KRKGESLDVNGKPPLTLRLGYARGAQVSYNGQPVDVAPFTSGETARLKL 332