Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  173 bits (438), Expect = 7e-48
 Identities = 111/357 (31%), Positives = 184/357 (51%), Gaps = 32/357 (8%)

Query: 11  TETTEQVNQPAIEKVAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVA 70
           T ++E+   PA E +  G +LK  RE  G++   +A  L LR S+++ +E + F +   A
Sbjct: 6   TPSSEEQEAPATESL--GQILKAAREAKGMSVADVATALHLRPSVVKDLEADDFSNISSA 63

Query: 71  TFTRGYLRSYAKAVGIRESEILCAFDDSYCQKPEV-QPDMKSFSKKTKRQLHDSRIMLIT 129
           T+ RGY++++A+ V   + ++         Q P V QP M+SFS+KT RQ  D R +++T
Sbjct: 64  TYIRGYIKNFARIVEADKQKVEACLAS---QVPGVSQPAMQSFSRKTVRQARDKRYLMLT 120

Query: 130 WVILAVIVGMSTLWWWQNSQKNSLI------PDKTTIAPSAISDIQSSNDASLANEDFAT 183
           ++++ ++V +   WW Q S+  +        P    +A +  + IQ      L NE    
Sbjct: 121 YLVILILVALLVFWWLQTSKFFNTAAVDFSKPTAEEVAAAGQTSIQDDLMQRLGNETHTQ 180

Query: 184 VPPLNELQDAAPASEEAPMSQESLSGEASELTPPAPNEADVVTDKPVVEETAAAPVAPAQ 243
                  Q    A+ E  ++ + +   A E+T  +  E     D     +T A+ +    
Sbjct: 181 AG--TSPQPDTEAAYEQSVNSDDMPVAAQEVTVGSAEEPSAQQDNNSAVDTTASDMRE-- 236

Query: 244 PQGQTPVQSQAPVAAAPVTQPEAAPSAPSQPVSSSTESASALLVMNFSADCWIQVKDATG 303
                 + ++A  A A    PE   S P+ P  S+       LVM+FSADCW+QVKDATG
Sbjct: 237 ------IDTRASNAEAT---PEVTASIPATPGQSA-------LVMSFSADCWVQVKDATG 280

Query: 304 KTLSTGVKKAGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTLP 360
           K L + ++KAGQ+++LSG+ P+  +LGAP+ V +++  E   L  +  G+VAR +LP
Sbjct: 281 KVLVSDLRKAGQTINLSGKAPFSFILGAPQAVKLSINGEAASLDEFPKGRVARFSLP 337