Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 31/270 (11%)

Query: 28  GTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSYAKAVGIR 87
           G LL+  R  +G    ++A+ LR+R   +Q+IEE R++D   A +  G++R+YA  +G+ 
Sbjct: 21  GALLRATRLRVGEPIARVAESLRIRQGYLQAIEEGRYQDLPGAAYAVGFVRAYADHLGLH 80

Query: 88  ESEILCAFDDSYCQKPEVQPDMKSFSKKTKRQLHDSRIMLITWVILAVIVGMSTLWWWQN 147
             E++  F D   Q       ++  +   +  +    ++ +  ++ A   G    W+W +
Sbjct: 81  AEEVVRRFKDE-TQSMAPAATLEFPAPAGEGGVPAGALVAVALILAACAYG---AWYWVS 136

Query: 148 SQKN---SLIPDKTTIAPSAISDIQSSNDA-----SLANEDFATVPPLNELQDAAPASEE 199
           S +     LIPD     P  ++ +   +       S A E     PP      A P+ E 
Sbjct: 137 SAEKPVAELIPD----IPDRLAALVGRSPGLPPGPSPAGEPLPVAPP-----QAGPSGEN 187

Query: 200 APMSQESLSGEASELTPPAPNE-----ADVVTDKPVVEETAAAPVAPAQPQGQTPVQSQA 254
           AP +  +++G   E   P P++      D  +  P+V   +A PVAP  P  Q       
Sbjct: 188 AP-ADPAMAGSPVETLMPGPDDEPRGATDPTSGLPLV---SAFPVAPVTPIDQGATAEAK 243

Query: 255 PVAAAPVTQPEAAPS-APSQPVSSSTESAS 283
           P AAAP  Q EA+    P   VS + ES S
Sbjct: 244 PDAAAPEPQAEASSQPEPEVLVSHTPESPS 273



 Score = 37.7 bits (86), Expect = 7e-07
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 7/148 (4%)

Query: 155 PDKTTIAPSAISDIQSSNDASLANEDFATVPPLNELQDAAPASEEAPMSQESLSGEASEL 214
           P KT   P A++ +Q    A  A        P     +  PA    P  + +    ++  
Sbjct: 299 PPKTPAEP-AVTVVQRPEPARPAQPTPEPAKPAQPTPE--PAKPAQPTPEPARPAPSTPP 355

Query: 215 TPP-APNEADVVTDKPVVEETAAAPVAPAQPQGQTPVQSQAPVAAAPVTQPEAAPSAPSQ 273
           +PP AP  +   + +P     A   V+P  P  +  V    P  A   TQ     S   Q
Sbjct: 356 SPPAAPAPSAAPSPQPAPPPAAGPAVSPPAPIAEA-VAPPPPPPAEEATQAPRQESVVGQ 414

Query: 274 PVSS--STESASALLVMNFSADCWIQVK 299
           P S   + ++ ++ +V+  ++D WIQ++
Sbjct: 415 PASGEVARQAQTSRIVLKAASDSWIQLR 442



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 185 PPLNELQDAAPASEEAPMSQESLSGEASELTPPAPNEADVVTDKPVVEETAAAPVAPAQP 244
           PP+       PA     + Q       ++ TP     A    +     +    P  PA  
Sbjct: 293 PPVVAAPPKTPAEPAVTVVQRPEPARPAQPTPEPAKPAQPTPEPAKPAQPTPEPARPAPS 352

Query: 245 QGQTPVQSQAPVAAAPVTQPEAAPSA-----PSQPVSSS 278
              +P  + AP +AAP  QP   P+A     P  P++ +
Sbjct: 353 TPPSPPAAPAP-SAAPSPQPAPPPAAGPAVSPPAPIAEA 390