Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., transcriptional regulator, XRE family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 81/348 (23%), Positives = 148/348 (42%), Gaps = 28/348 (8%)

Query: 28  GTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSYAKAVGIR 87
           G  L++ RE  GL    +A R+++   ++++IE+   +    + + RG+++SYA  +G+ 
Sbjct: 7   GIALREAREAKGLDIDDVAIRIKVSARVLRAIEDGEQDQLPHSVYARGFIKSYATVLGVD 66

Query: 88  ESEILCAFDDSY-CQKPEVQPDMKSFSKKTKRQLHDSRIMLITWVILAVIVGMSTLWWW- 145
              ++   D++Y  + PE        ++   R      ++ +  V+L ++  +  +W++ 
Sbjct: 67  NDLVMRVVDETYPFEVPEDLLPETVVAQPHARGRTGLSLVALALVLLTLLAALGGVWYYR 126

Query: 146 QNSQKNSLIPDKTTIAPSAISDIQSSNDASLANEDFATVPPLNELQDAAPASEEAPMSQE 205
           Q + + + +P     A    +D Q +       +D    P      DAAPAS     +  
Sbjct: 127 QQASREADLPKVAQPAQPPQADPQPA-----PAQDAVPAP------DAAPASNATNATVS 175

Query: 206 SLSGEASELTPPAPNEADVVTDKPVVEETAA----APVAPAQPQGQTPVQSQAPVA--AA 259
           +++   +E +P A +        P    ++A    AP A A  QG TP  + A  A  AA
Sbjct: 176 AVAPSVNETSPAAGSATQPARTSPAAAASSAAQVPAPAAQAPAQGATPAAAPATPAAPAA 235

Query: 260 PVTQP-------EAAPSAPSQPVSSSTESASALLVMNFSADCWIQVKDATGKTLSTGVKK 312
            VT P       EAA ++ +    S     +  +V+   ADCW+             + K
Sbjct: 236 AVTGPQGGVYDSEAAATSGADTDGSMLAGGTHRIVVIALADCWVHSSADDSDVRQFSLHK 295

Query: 313 AGQSVSLSGQRPYKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTLP 360
            GQ+ +L+  +   L LG   GV I    +     G   G+V  L  P
Sbjct: 296 -GQTFALTFSKRLTLKLGNAGGVRIRYNGQEQPAPG-DMGQVRTLVFP 341