Pairwise Alignments

Query, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  148 bits (373), Expect = 3e-40
 Identities = 113/372 (30%), Positives = 183/372 (49%), Gaps = 58/372 (15%)

Query: 25  VAPGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSYAKAV 84
           V  GT+L+  RE +GL+    A +L LR  I++++E + F +   +T+ RGY+++YA+ +
Sbjct: 24  VTLGTVLRTAREQMGLSIADTAVKLHLRPGIVENLEADDFSNISSSTYVRGYVKNYARML 83

Query: 85  GIRESEILCAFDDSYCQKPEV-QPDMKSFSKKTKRQLHDSRIMLITWVILAVIVGMSTLW 143
           G+  + I         Q P V QP M+SFS+KT  Q  D+++  +++ I+ V++G+  LW
Sbjct: 84  GVDNALIEACLAR---QVPLVTQPAMQSFSRKTTYQARDTKLKWLSFFIVIVLLGLFVLW 140

Query: 144 WWQNSQ-----------------KNSLIPDKT----TIAPSAISDI----QSSNDASLAN 178
           W Q +                   N  +P       T A   +S+I      + D  + +
Sbjct: 141 WMQRTTLVTHVDVSQPTAEELAAANQTLPGDVLLTETDASERLSEIAVNGSMATDGPIKD 200

Query: 179 EDFATVPPLNELQDAAPASEEAPM-SQESLSGEASELTPPAPNEADVVTDKPVVEETAAA 237
            D +T+ P N    AA   E+ P  S  + SG  + LT  A N A           ++AA
Sbjct: 201 TDESTIDP-NMNDTAAMEVEQTPANSAVNPSGSNNALTNNASNTAP----------SSAA 249

Query: 238 PVAPAQPQGQTPVQSQAPVAAAPVTQPEAAPSAPSQPVSSSTESASAL--------LVMN 289
             A A P             AA  T PE  PSA + P +++  +A A+        + + 
Sbjct: 250 SNAVAIPN--------VTQNAATNTAPEQNPSASNAPATNTASTAQAMPVAAGQSSITIE 301

Query: 290 FSADCWIQVKDATGKTLSTGVKKAGQSVSLSGQRPYKLVLGAPEGVS-ITLASEPVDLSG 348
            + DCWI + DA GK +  GV+ AG ++  SG  P+K++LGAP  VS  T+  + + L+ 
Sbjct: 302 LTGDCWINIVDAKGKAIVDGVRGAGANIQASGVPPFKVILGAPTVVSTFTVDGKAISLAE 361

Query: 349 YTSGKVARLTLP 360
           +  G+VARLT+P
Sbjct: 362 FPKGRVARLTIP 373