Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  409 bits (1051), Expect = e-119
 Identities = 207/359 (57%), Positives = 260/359 (72%), Gaps = 3/359 (0%)

Query: 2   TTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61
           +T K NLL   +  +  FF + +GEK FRA QVMKWI+HFG DDFD M N+ K LREKLK
Sbjct: 4   STVKTNLLGLTQPEMEKFF-DSIGEKRFRAGQVMKWIHHFGVDDFDAMTNVGKALREKLK 62

Query: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGDQD-VETVYIPEDDRATLCVSSQVGCALECKF 120
           A  EIR P V     S+DGT KW +RV     VETVYIP+  R TLCVSSQ GCAL+C F
Sbjct: 63  AVAEIRGPEVVSQDISSDGTRKWVVRVASGSCVETVYIPQGKRGTLCVSSQAGCALDCSF 122

Query: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA 180
           CST +QGFN NL  +E+IGQVW A +  G    T  R ITNVVMMGMGEPLLN  N++ A
Sbjct: 123 CSTGKQGFNSNLTAAEVIGQVWIANKSFGSVPATVDRAITNVVMMGMGEPLLNFDNVVSA 182

Query: 181 LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR 240
           + +M+DDLG+G+SKRRVT+STSGVV  ++++   IDV+LA+SLHAPND LR++++PIN +
Sbjct: 183 MHLMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDALRNQLVPINKK 242

Query: 241 WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF 300
           + ++  LE  +RY++S    R  +T+EY LL  VND  EHA E+ ELLK  PCKINLIPF
Sbjct: 243 YPLKMLLESCQRYMSSLGEKR-VLTIEYTLLKDVNDKVEHAVEMIELLKNIPCKINLIPF 301

Query: 301 NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           NP+P S Y++PSN+ I RFQ  L      VT+R TRG+DIDAACGQLVG V+DRT+R++
Sbjct: 302 NPFPHSGYERPSNNAIRRFQDQLHHAGFNVTVRTTRGEDIDAACGQLVGQVLDRTRRSE 360