Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  215 bits (547), Expect = 2e-60
 Identities = 124/331 (37%), Positives = 194/331 (58%), Gaps = 21/331 (6%)

Query: 25  GEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLKAKCEIRAPYVSEAQHSADGTIKW 84
           G+ ++RA+Q+ +W+Y     +  +++   K  R+ L+A    R+  V  +  S  GTIK+
Sbjct: 33  GQPSYRAKQLYQWLYERSIHNLAEISVFPKAWRQSLQAVPVGRSQIVDRSV-SPSGTIKY 91

Query: 85  AMRVGDQDV-ETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWR 143
            +R+ D ++ E V IP  DR T+CVSSQ+GCA+ C FC+T + GF R+L   EII QV  
Sbjct: 92  LLRLHDGEIIEAVGIPSGDRLTVCVSSQLGCAMACDFCATGKGGFRRHLAPHEIIDQVLT 151

Query: 144 AAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPALEIMLDDLGFGLSKRRVTVSTSG 203
                   +E  ++ ++N+V MGMGEPLLN+  ++ A+  +  D+G G  +R +TVST G
Sbjct: 152 V-------QEDWQQRVSNIVFMGMGEPLLNLDAVLAAIRCLNQDIGIG--QRGITVSTVG 202

Query: 204 VVSGLEQM-----IGQ--IDVALAISLHAPNDKLRSEIMPINDRWNIEAFLEVVRRYIAS 256
           +   + ++     +G   +   LA+SLHAPN  +R  ++P +  + I   L+  R Y+  
Sbjct: 203 IPGHIRRLAETKRVGDRPLQFTLAVSLHAPNQAIRDRLIPSSRHYPITDLLQECRDYVQI 262

Query: 257 SNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPFNPYPGSPYKKPSNSRI 316
           +     +VT EY+LL  +ND  E A +LA+LL+G    +NLIP+NP     Y++PS +R+
Sbjct: 263 TGR---RVTFEYILLAGLNDQPEQAEQLAQLLRGFQSHVNLIPYNPIDEVEYQRPSKARV 319

Query: 317 DRFQKTLMQYEHTVTIRKTRGDDIDAACGQL 347
           D F   L Q    VT+R ++G   DAACGQL
Sbjct: 320 DAFADALRQQRVAVTVRWSKGLGADAACGQL 350