Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  518 bits (1334), Expect = e-151
 Identities = 249/371 (67%), Positives = 303/371 (81%), Gaps = 2/371 (0%)

Query: 1   MTTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKL 60
           M+ +KINLLD D  GL+    E +GEK FRA+Q+M+WIYHFG  DF+QM NINK +R KL
Sbjct: 1   MSEKKINLLDLDLPGLKALLTE-MGEKPFRAQQIMQWIYHFGVSDFEQMTNINKAMRAKL 59

Query: 61  KAKCEIRAPYVSEAQHSADGTIKWAMRVGD-QDVETVYIPEDDRATLCVSSQVGCALECK 119
            A+CEI AP ++  Q S+DGTIK+A+ VG  Q+VETVYIPEDDRATLCVSSQVGCALEC 
Sbjct: 60  AARCEIVAPEITSYQKSSDGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECT 119

Query: 120 FCSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIP 179
           FCSTAQQGFNRNL VSEI+GQ+WR +  +G +KETG RPI+NVVMMGMGEPLLN+ N++P
Sbjct: 120 FCSTAQQGFNRNLTVSEIVGQIWRVSHFLGFQKETGERPISNVVMMGMGEPLLNLANVVP 179

Query: 180 ALEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPIND 239
           A+ IMLDD GFGLSKRRVT+STSGVV  L+++   IDVALA+S+HAPND+LR  ++PIN 
Sbjct: 180 AMNIMLDDYGFGLSKRRVTLSTSGVVPALDKLGDVIDVALAVSIHAPNDELRDVLVPINK 239

Query: 240 RWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIP 299
           ++ ++ FL  +RRY+  SNANRG+VT+EYV+LDH+ND T+ AHELA+L+K TPCKINLIP
Sbjct: 240 KYPLQEFLAAIRRYLEKSNANRGRVTLEYVMLDHINDSTDQAHELAKLMKDTPCKINLIP 299

Query: 300 FNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           FNPYPGSPY + SNSRIDRF K LM+Y+ TV +RKTRGDDIDAACGQL GD+ DRTKR  
Sbjct: 300 FNPYPGSPYGRSSNSRIDRFAKVLMEYDLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLA 359

Query: 360 AKQFDGQAIPV 370
            K+     I V
Sbjct: 360 KKRMQESQISV 370