Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., ribosomal RNA large subunit methyltransferase N from Phaeobacter inhibens DSM 17395

 Score =  302 bits (773), Expect = 1e-86
 Identities = 170/373 (45%), Positives = 230/373 (61%), Gaps = 15/373 (4%)

Query: 5   KINLLDFDRKGLR-TFFAEELGEKA--FRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61
           KINL+   R  LR T  A    EK    R  Q+ +WIY +G  DF +M N+ K  R  L 
Sbjct: 23  KINLVGLTRDQLRETLIAHGTPEKQAKMRVGQIWQWIYQWGKRDFAEMTNLAKAYRADLD 82

Query: 62  AKCEIRAPYVSEAQHSADGTIKWAMRV-GDQDVETVYIPEDDRATLCVSSQVGCALECKF 120
              EI  P V   Q S DGT K+ +R+ G  +VE VYIPE+ R TLC+SSQVGC L C F
Sbjct: 83  EHFEIATPEVVSKQVSTDGTRKYLVRIAGGHEVEVVYIPEEGRGTLCISSQVGCTLTCSF 142

Query: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREI------GLEKETGRRPITNVVMMGMGEPLLNM 174
           C T  Q   RNL  +EI+GQ+  A  ++      G  K+  R  ++N+V+MGMGEPL N 
Sbjct: 143 CHTGTQKLVRNLTAAEIVGQIMMARDDLDEWPVPGAPKDETRL-LSNIVLMGMGEPLYNF 201

Query: 175 KNLIPALEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEI 234
           +N+  A++I +D  G  LS+RR+T+STSGVV  + +   +I   LA+S HA  D++R ++
Sbjct: 202 ENVRDAMKIAMDPEGISLSRRRITLSTSGVVPEIARTAEEIGCLLAVSFHATTDEVRDKL 261

Query: 235 MPINDRWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCK 294
           +PIN RWNIEA LE +R Y   +N+ R  +T EYV+L+ VND  E AH L EL+KG P K
Sbjct: 262 VPINKRWNIEALLEALRAYPRLTNSER--ITFEYVMLNGVNDSDEDAHRLVELIKGIPAK 319

Query: 295 INLIPFNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDR 354
           +NLIPFN +PGSPY + SN+RI  F   + Q  +   IR  RG+DI AACGQL     +R
Sbjct: 320 VNLIPFNEWPGSPYTRSSNNRIHAFANIIYQAGYASPIRTPRGEDILAACGQL-KSATER 378

Query: 355 TKRTKAKQFDGQA 367
            ++++ KQ + +A
Sbjct: 379 ARKSR-KQIEAEA 390