Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  530 bits (1365), Expect = e-155
 Identities = 255/371 (68%), Positives = 307/371 (82%), Gaps = 2/371 (0%)

Query: 1   MTTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKL 60
           M+ +KINLLD DRKGLR  F E +GEK FRA+Q+MKW+YHFG  DF+QM NINK LR KL
Sbjct: 1   MSEKKINLLDLDRKGLRALFTE-MGEKPFRADQLMKWLYHFGVSDFEQMTNINKVLRAKL 59

Query: 61  KAKCEIRAPYVSEAQHSADGTIKWAMRVGD-QDVETVYIPEDDRATLCVSSQVGCALECK 119
            A+CE+ AP +S  Q SADGTIK+A+ VG+ Q+VETVYIPE+DRATLCVSSQVGCALEC 
Sbjct: 60  AARCEVVAPEISSYQKSADGTIKFAINVGNGQEVETVYIPEEDRATLCVSSQVGCALECT 119

Query: 120 FCSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIP 179
           FCSTAQQGFNRNL VSEI+GQ+WR +  +G +KETG RPI+NVVMMGMGEPLLN+KN++P
Sbjct: 120 FCSTAQQGFNRNLTVSEIVGQIWRVSHFLGFQKETGERPISNVVMMGMGEPLLNLKNVMP 179

Query: 180 ALEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPIND 239
           A++IMLDD GF LSKRRVTVSTSGVV  L+ +   +DVALA+S+HAPND+LR  ++P+N 
Sbjct: 180 AIDIMLDDFGFSLSKRRVTVSTSGVVPALDILGDNLDVALAVSIHAPNDELRDVLVPVNK 239

Query: 240 RWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIP 299
           ++ ++ FL  +RRY+A SNANRG+VT+EYV+LDH+ND T+ AHELAEL+K TPCKINLIP
Sbjct: 240 KYPLQEFLAAIRRYLAKSNANRGRVTLEYVMLDHINDSTDQAHELAELMKDTPCKINLIP 299

Query: 300 FNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           FNPYPGSPY + SNSRIDRF K LM+Y  TV +RKTRGDDIDAACGQL GD+ DRTKR  
Sbjct: 300 FNPYPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLA 359

Query: 360 AKQFDGQAIPV 370
            K+     I V
Sbjct: 360 KKRMQDSQISV 370