Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., conserved hypothetical protein TIGR00048 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  529 bits (1363), Expect = e-155
 Identities = 257/371 (69%), Positives = 307/371 (82%), Gaps = 2/371 (0%)

Query: 1   MTTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKL 60
           M+ +KINLLD DRK +R  FA+ LGEK FRA+Q+MKWIYHFG  DF++M NINK LR+KL
Sbjct: 1   MSEKKINLLDLDRKAMRALFAD-LGEKPFRADQLMKWIYHFGVSDFEEMTNINKVLRQKL 59

Query: 61  KAKCEIRAPYVSEAQHSADGTIKWAMRVGD-QDVETVYIPEDDRATLCVSSQVGCALECK 119
            A+CEI AP +S  Q SADGTIK+A+ VG+ Q+VETVYIPEDDRATLCVSSQVGCALEC 
Sbjct: 60  AARCEIVAPEISGYQKSADGTIKFAIHVGEGQEVETVYIPEDDRATLCVSSQVGCALECT 119

Query: 120 FCSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIP 179
           FCSTAQQGFNRNL VSEI+GQ+WR +  +G  KETG RPITNVVMMGMGEPLLN+ N+IP
Sbjct: 120 FCSTAQQGFNRNLTVSEIVGQIWRVSHFLGFAKETGERPITNVVMMGMGEPLLNLANVIP 179

Query: 180 ALEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPIND 239
           A++IMLDD GF LSKRRVT+STSGVV  L+++   +DVALA+S+HAPND+LR  ++P+N 
Sbjct: 180 AMDIMLDDFGFSLSKRRVTLSTSGVVPALDKLGDALDVALAVSIHAPNDELRDILVPVNK 239

Query: 240 RWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIP 299
           ++ ++ FL  +RRYIA SNANRG+VTVEYV+LDH+ND TE AHELA+L+K TPCK+NLIP
Sbjct: 240 KYPLQEFLAGIRRYIAKSNANRGRVTVEYVMLDHINDSTEQAHELAQLMKDTPCKVNLIP 299

Query: 300 FNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359
           FNPYPGSPY + SNSRIDRF K LM+Y  TV +RKTRGDDIDAACGQL GD+ DRTKR  
Sbjct: 300 FNPYPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLA 359

Query: 360 AKQFDGQAIPV 370
            K+     I V
Sbjct: 360 KKRMQENQISV 370