Pairwise Alignments

Query, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase from Sphingomonas koreensis DSMZ 15582

 Score =  274 bits (700), Expect = 3e-78
 Identities = 159/350 (45%), Positives = 210/350 (60%), Gaps = 9/350 (2%)

Query: 5   KINLLDFDRKGLRTFFAE---ELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61
           +I+LL   +  LR        E  +   RA+Q+  WIY+ G  DF  M +I+K ++  L 
Sbjct: 23  RIDLLGLSKLDLRMALETSQLEPKQAKLRAKQLWHWIYNRGVTDFSLMTDISKTMQPWLA 82

Query: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGD-QDVETVYIPEDDRATLCVSSQVGCALECKF 120
            +  I  P V EAQ S DGT KW +R  D QD E V+IP+ DR TLCVSSQVGC L C+F
Sbjct: 83  QRFVISRPEVIEAQVSTDGTRKWLLRSDDGQDYEMVFIPDADRGTLCVSSQVGCTLNCRF 142

Query: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIG-LEKETGRRPITNVVMMGMGEPLLNMKNLIP 179
           C T      RNL   EI+GQV  A   +G    +   R +TN+VMMGMGEPL N  N+  
Sbjct: 143 CHTGTMRLVRNLEPGEIVGQVMLARDALGEWPSQPDGRMLTNIVMMGMGEPLYNFDNVRD 202

Query: 180 ALEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPIND 239
           AL I++D  G  LSKRR+T+STSGVV  +E+   +I V LA+SLHA   ++R EI+P+N 
Sbjct: 203 ALRIVMDGDGLALSKRRITLSTSGVVPMMERAGEEIGVNLAVSLHAVTKEVRDEIVPLNR 262

Query: 240 RWNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLK--GTPCKINL 297
           ++ IE  L+    Y  ++NA R  +T EYV+L   ND  + A EL  L+K    P K+NL
Sbjct: 263 KFGIEELLQACADYPGANNARR--ITFEYVMLKDKNDSDDDARELVRLIKQYKLPAKVNL 320

Query: 298 IPFNPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQL 347
           IPFNP+PG+PY+  +  RI  FQ+ +     +   R  RG DIDAACGQL
Sbjct: 321 IPFNPWPGAPYECSTPERIRAFQEIVFGAGISAPARTPRGRDIDAACGQL 370