Pairwise Alignments

Query, 429 a.a., peptidase B from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., peptidase B (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  384 bits (986), Expect = e-111
 Identities = 215/423 (50%), Positives = 271/423 (64%), Gaps = 6/423 (1%)

Query: 5   MSVFLSTQAAQPQWGEKALISFAEQGATIHLQQTQDFSAIQRAARKLDNQGIRTAFLAGE 64
           MSV L+       WG KA ++FA +GA +HL    +   IQ AARKL NQGI    L+G 
Sbjct: 10  MSVALTKDTPAAHWG-KADVTFAAEGALVHLSGGDELRQIQMAARKLRNQGISNVALSGS 68

Query: 65  GWDLESIWAFYQGYRDAKKRNTVEWKALAAAEQVELEARIKATDWTRDIINKSAEEVAPR 124
            WDL S W F QG+  AK    ++W   A   Q EL+ RI+   + R +IN++ E ++P 
Sbjct: 69  LWDLNSQWVFAQGFATAKPGYKIQWCGDAEV-QAELQRRIEVATFARQLINETPENLSPV 127

Query: 125 QLATMAAEFIKSLAPDHVSYRIVKDKDLLTEGWEGIYAVGRGSERTSAMLQLDYNPTGDE 184
           +LA  AA+++  +    VSYRI++ + LL E W GI+AVGRGSER  AML+LD+NP   +
Sbjct: 128 KLAQQAAKWLADIGGAKVSYRIIEGEALLAEQWIGIHAVGRGSERPPAMLELDFNPLAAD 187

Query: 185 NAPVFACLVGKGITFDSGGYSLKPSNMMSAMKADMGGSGMITGALGLAIMRGFNKRVKLI 244
            APV   LVGKGITFDSGGYS+K S  M  MK DMGG+  +T ALGLAI  G NKRVKL 
Sbjct: 188 -APVSVALVGKGITFDSGGYSIKASEGMLGMKCDMGGAATVTAALGLAIKSGLNKRVKLF 246

Query: 245 LCCAENMVSGRALKLGDIITYKNGKTVEIMNTDAEGRLVLADGLIYASEQKPQLIIDCAT 304
           LCCAEN++SGRA KLGDI+TYKNG TVE++NTDAEGRLVLADGL  AS      IID AT
Sbjct: 247 LCCAENLISGRAYKLGDILTYKNGVTVEVVNTDAEGRLVLADGLQAASATGAPFIIDAAT 306

Query: 305 LTGAAKNALGNDYHALLSYDESLSQQALAAAKEENEALWALPLAEFHREMLPSNFADLSN 364
           LTGAA  A+G++Y+A+ S    + Q A   A    E +W LPL  +H+EM PS++AD +N
Sbjct: 307 LTGAAVMAVGSNYNAIFSPQVDVLQLAQQKASTVAERVWPLPLDPWHKEMCPSSYADTAN 366

Query: 365 IS--NGDYTPGASTAAAFLSYFVEGYQKGWLHFDCSATYRKSASDKWAAGATGMGVKMLA 422
                G    GAS AA FL  FV    K WLH D +A +  SAS  W AGAT  GV  ++
Sbjct: 367 SRPVKGGGAGGASNAAGFLWRFVSPEAK-WLHVDLAAAFEDSASALWGAGATTHGVLTIS 425

Query: 423 RIL 425
            ++
Sbjct: 426 ELI 428