Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Chaperone protein DnaK from Pseudomonas fluorescens FW300-N2E2

 Score =  419 bits (1076), Expect = e-121
 Identities = 247/605 (40%), Positives = 367/605 (60%), Gaps = 38/605 (6%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADAT-RVGYPAREQAETDPHNT 81
           GIDLGTTNS V+ + +G A  + +++G    PS++ Y  D    VG  A+ QA T+PHNT
Sbjct: 6   GIDLGTTNSCVSVLENGKAKVIENAEGARTTPSIIAYANDGEILVGQSAKRQAVTNPHNT 65

Query: 82  VISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAE 139
           + +VKRL+GR   +  + +    +PY+   ++ G   V+       P QISA+ILK + +
Sbjct: 66  LYAVKRLIGRKFDEEVVQKDIKMVPYKIAKADNGDAWVEVNGQKMAPPQISAEILKKMKK 125

Query: 140 RATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ 199
            A   LG  +   VITVPAYF+D+QR ATKDA  +AGL V R++NEPTAAA+AYG+D  +
Sbjct: 126 TAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGMDKAK 185

Query: 200 -EGVIAVYDLGGGTFDISILRLSR----GVFEVLATGGDSALGGDDFDHLIADHL----- 249
            +  + VYDLGGGTFD+S++ ++       FEVLAT GD+ LGG+DFD  + D+L     
Sbjct: 186 GDHTVIVYDLGGGTFDVSVIEIAEVDGEHQFEVLATNGDTFLGGEDFDIRLIDYLVDEFK 245

Query: 250 -QAQIGLTSLTAEQQRALINAATQAKIDLTE---------YMTAE------LNVLGWQGS 293
            ++ + L       QR L  AA +AKI+L+          Y+TA+      LNV      
Sbjct: 246 KESGMNLKGDPLAMQR-LKEAAEKAKIELSSSQSTDVNLPYITADATGPKHLNV-----K 299

Query: 294 LTREELENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGR 353
           ++R +LE L+  L+++T+  CR A+KDAG++   + +V++VGG TR P V++ V +FFG+
Sbjct: 300 ISRAKLEALVEDLVQRTIEPCRIAMKDAGIDVGSINDVILVGGQTRMPLVQKLVTDFFGK 359

Query: 354 TPLTSINPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTT 413
                +NPDE VA+GAAIQ  +LAG+  D  +LLLDV PL+LGIETMGG++  +I +NTT
Sbjct: 360 EARKDVNPDEAVAMGAAIQGAVLAGDVKD--VLLLDVSPLTLGIETMGGVMTALIEKNTT 417

Query: 414 IPVARAQEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQ 473
           IP  ++Q F+T  D Q A+++HV+QGER+     +SL +F L  IPP   G   I VT+ 
Sbjct: 418 IPTKKSQVFSTADDNQGAVTIHVLQGERKQAAQNKSLGKFDLAEIPPAPRGVPQIEVTFD 477

Query: 474 VDADGLLSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRV 533
           +DA+G+L V A +K+TG    I +K + GLS++E+ QM++D+   A+ED     LA  R 
Sbjct: 478 IDANGILHVGAKDKATGKTQSIVIKANSGLSEEEIQQMVRDAEVNAEEDRKFEELASARN 537

Query: 534 EADRVIEGLVSALQADGDELLNEQERQTLLQAIERLIELRNGDNADAIEQGIKDTDKASQ 593
           + D ++      + AD  E +  +E+  +  A+  L     GD+  AIE  I++  K S 
Sbjct: 538 QGDALVHS-TRKMIADAGEKVTAEEKTAIEAAVVALEAAVKGDDKAAIEAKIEELSKVSA 596

Query: 594 DFASR 598
             A +
Sbjct: 597 PVAQK 601