Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., chaperone protein DnaK from Pseudomonas stutzeri RCH2

 Score =  421 bits (1082), Expect = e-122
 Identities = 254/622 (40%), Positives = 378/622 (60%), Gaps = 39/622 (6%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADAT-RVGYPAREQAETDPHNT 81
           GIDLGTTNS V+ + +G A  + +++G    PS++ Y  D    VG  A+ QA T+PHNT
Sbjct: 6   GIDLGTTNSCVSILENGKAKVIENAEGGRTTPSIIAYANDGEILVGQSAKRQAVTNPHNT 65

Query: 82  VISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAE 139
           + +VKRL+GR   +  + +    +PY+   ++     V+       P QISA+ILK + +
Sbjct: 66  LYAVKRLIGRRFDEDVVQKDIQMVPYKIVKADNSDAWVEVNGQKMAPPQISAEILKKMKK 125

Query: 140 RATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ 199
            A   LG  +   VITVPAYF+D+QR ATKDA  +AGL V R++NEPTAAA+AYG+D  +
Sbjct: 126 TAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGMDKAK 185

Query: 200 -EGVIAVYDLGGGTFDISILRLSR----GVFEVLATGGDSALGGDDFDHLIADHL----- 249
            +  + VYDLGGGTFD+S++ ++       FEVLAT GD+ LGG+DFD  + D+L     
Sbjct: 186 GDHTVIVYDLGGGTFDVSVIEIAEVDGEHQFEVLATNGDTFLGGEDFDIRLIDYLVDEFK 245

Query: 250 -QAQIGLTSLTAEQQRALINAATQAKIDLTE---------YMTAE------LNVLGWQGS 293
            ++ + L       QR L  AA +AKI+L+          Y+TA+      LNV      
Sbjct: 246 KESGMNLKGDPLAMQR-LKEAAEKAKIELSSSQQTDVNLPYITADATGPKHLNV-----K 299

Query: 294 LTREELENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGR 353
           ++R +LE L+  L+++T+  CR ALKDAGV+  ++ +V++VGG TR P V+++V EFFG+
Sbjct: 300 ISRAKLEALVEDLVQRTIEPCRIALKDAGVDVSKIDDVILVGGQTRMPLVQQKVAEFFGK 359

Query: 354 TPLTSINPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTT 413
                +NPDE VA+GAAIQ  +LAG+  D  +LLLDV PL+LGIET+GG++  +I +NTT
Sbjct: 360 EARKDVNPDEAVAMGAAIQGAVLAGDVKD--VLLLDVSPLTLGIETLGGVMTPLIEKNTT 417

Query: 414 IPVARAQEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQ 473
           IP  ++Q F+T  D Q+A+++HV+QGER+     +SL RF L  IPP   G   I VT+ 
Sbjct: 418 IPTKKSQVFSTADDNQSAVTIHVLQGERKQATGNKSLGRFDLAEIPPAPRGMPQIEVTFD 477

Query: 474 VDADGLLSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRV 533
           +DA+G+L V+A +K+TG Q  I +K + GLS++E+ QM++D+ A A+ED     LA  R 
Sbjct: 478 IDANGILHVSAKDKATGKQQSIVIKANSGLSEEEIEQMVRDAEANAEEDRKFEELATARN 537

Query: 534 EADRVIEGLVSALQADGDELLNEQERQTLLQAIERLIELRNGDNADAIEQGIKDTDKASQ 593
           + D+++      L   GD+  ++ ++  + +A+  L     GD+   IE  I    +AS 
Sbjct: 538 QGDQLVHATRKMLVEAGDK-ASDDDKAAIEKALGELELAIKGDDKAEIEAKIAAVSQAST 596

Query: 594 DFASRRMDKSIRSALAGHSVDE 615
             A ++M      A  G   DE
Sbjct: 597 PVA-QKMYAEQAQAGEGQPADE 617