Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., molecular chaperone DnaK from Sinorhizobium meliloti 1021

 Score =  442 bits (1136), Expect = e-128
 Identities = 257/579 (44%), Positives = 369/579 (63%), Gaps = 26/579 (4%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADATR-VGYPAREQAETDPHNT 81
           GIDLGTTNS V+ +    A  + +++G    PS+V +  D  R VG PA+ QA T+P NT
Sbjct: 6   GIDLGTTNSCVSVMDGKDAKVIENAEGARTTPSMVAFTEDGERLVGQPAKRQAVTNPENT 65

Query: 82  VISVKRLLGRSLQDINQRYPH--LPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAE 139
           + ++KRL+GR+ +D   +     +PY+   ++ G   V+      +P QISA IL+ + E
Sbjct: 66  LFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWVEAHGTSYSPSQISAMILQKMKE 125

Query: 140 RATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ 199
            A + LG ++   VITVPAYF+DAQR ATKDA  +AGL VLR++NEPTAAA+AYGLD  +
Sbjct: 126 TAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKE 185

Query: 200 EGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLIADHLQAQ------I 253
              IAVYDLGGGTFDIS+L +  GVFEV +T GD+ LGG+DFD  + ++L ++      I
Sbjct: 186 GKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGI 245

Query: 254 GLTSLTAEQQRALINAATQAKIDLTEYMTAELNV----------LGWQGSLTREELENLI 303
            L +     QR L  AA +AKI+L+     E+N+                L+R + E+L+
Sbjct: 246 DLKNDKLALQR-LKEAAEKAKIELSSSQQTEINLPFITADASGPKHLTMKLSRAKFESLV 304

Query: 304 APLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTSINPDE 363
             L++KT+  C+ ALKDAGV A E+ EVV+VGG TR P V+E V + FG+ P   +NPDE
Sbjct: 305 EDLIQKTIAPCKAALKDAGVSAAEIDEVVLVGGMTRMPKVQETVKQLFGKEPHKGVNPDE 364

Query: 364 VVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVARAQEFT 423
           VVA+GAAIQA +L G+  D  +LLLDV PLSLGIET+GG+  ++I RNTTIP  ++Q F+
Sbjct: 365 VVAMGAAIQAGVLQGDVKD--VLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFS 422

Query: 424 TFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVT 483
           T  D Q+A+++ V QGEREM  D + L +F L GIPP   G   I VT+ +DA+G++ V+
Sbjct: 423 TADDNQSAVTIRVSQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVQVS 482

Query: 484 ALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEADRVIEGLV 543
           A +K TG + +I+++ S GLSD E+ +M+KD+ A A+ D   R   E + +A+ ++    
Sbjct: 483 AKDKGTGKEHQIRIQASGGLSDAEIEKMVKDAEANAEADKKRREGVEAKNQAESLVHSSE 542

Query: 544 SALQADGDELLNEQERQTLLQAIERL---IELRNGDNAD 579
            +LQ  GD+ ++E +R+ +  AI  L   +E+   D  D
Sbjct: 543 KSLQEHGDK-VSETDRKAIEDAIAALKSAVEVSEPDAED 580