Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., chaperone protein DnaK (RefSeq) from Shewanella loihica PV-4

 Score =  422 bits (1084), Expect = e-122
 Identities = 245/593 (41%), Positives = 364/593 (61%), Gaps = 27/593 (4%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADATRVGYPAREQAETDPHNTV 82
           GIDLGTTNS VA +    A  + +++G    PS++ Y  +   VG PA+ QA T+P NT 
Sbjct: 6   GIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYTGEEVLVGQPAKRQAVTNPKNTF 65

Query: 83  ISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAER 140
            ++KRL+GR  +D  + +    +P++  A++ G   V+       P Q+SA+ILK + + 
Sbjct: 66  FAIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWVEAHDKKMAPPQVSAEILKKMKKT 125

Query: 141 ATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ- 199
           A   LG  +   VITVPAYF+D+QR ATKDA  +AGL V R++NEPTAAA+AYG+D  Q 
Sbjct: 126 AEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQG 185

Query: 200 EGVIAVYDLGGGTFDISILRLS----RGVFEVLATGGDSALGGDDFDHLIADHL------ 249
           + ++AVYDLGGGTFDISI+ +        FEVLAT GD+ LGG+DFD+ + ++L      
Sbjct: 186 DNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLINYLADEFKK 245

Query: 250 QAQIGLTSLTAEQQRALINAATQAKIDLTEYMTAELNVLGWQGS----------LTREEL 299
           +  + L +     QR L  AA +AKI+L+     E+N+                +TR +L
Sbjct: 246 EQSLDLRNDPLAMQR-LKEAAEKAKIELSSTTQTEVNLPYITADATGPKHLVVKITRAKL 304

Query: 300 ENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTSI 359
           E+L+  L++++L   + AL DA +   ++ EV++VGG TR P VR +V  FFG+     +
Sbjct: 305 ESLVEDLIQRSLEPLKVALADADLSVSDINEVILVGGQTRMPKVRAEVSAFFGKELRQDV 364

Query: 360 NPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVARA 419
           NPDE VAIGAA+QA +LAG+  D  +LLLDV PLSLGIETMG ++ K+I +NTTIP   +
Sbjct: 365 NPDEAVAIGAAVQAGVLAGDVKD--VLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAS 422

Query: 420 QEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGL 479
           Q F+T  D Q+A+++HV+QGER+     +SL +F+L+GI P   G   I V + +DADG+
Sbjct: 423 QTFSTADDNQSAVTIHVLQGERKQSSANKSLGQFNLEGIEPAPRGMPQIEVAFDIDADGI 482

Query: 480 LSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEADRVI 539
           L V+A +K TG    I +K S GLSD+EV  M++D+ A+A ED     L   R +AD ++
Sbjct: 483 LHVSATDKKTGKAQNITIKASSGLSDEEVEAMVRDAEAHADEDAKFEELVSARNQADGMV 542

Query: 540 EGLVSALQADGDELLNEQERQTLLQAIERLIELRNGDNADAIEQGIKDTDKAS 592
                 ++  GD L +E +++ +  A+  +     G++ +AIE+  +   +AS
Sbjct: 543 HATKKQIEEAGDALPSE-DKEKIEAAMADVDTATKGNDKEAIEKATQALMEAS 594