Pairwise Alignments

Query, 616 a.a., chaperone protein HscA from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chaperone protein DnaK (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  434 bits (1117), Expect = e-126
 Identities = 252/595 (42%), Positives = 371/595 (62%), Gaps = 31/595 (5%)

Query: 23  GIDLGTTNSLVASVRSGTASTLVDSQGRSILPSVVNYGADATRVGYPAREQAETDPHNTV 82
           GIDLGTTNS VA +  G A  L +++G    PS++ Y  D T VG PA+ QA T+P+NT 
Sbjct: 6   GIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTDDETIVGQPAKRQAVTNPNNTF 65

Query: 83  ISVKRLLGRSLQD--INQRYPHLPYRFKASEKGLPIVQTAQGDKNPIQISADILKALAER 140
            ++KRL+GR  +D  + +    +P++  A++ G   V++      P Q+SA+ILK + + 
Sbjct: 66  FAIKRLIGRRFKDDEVQRDVNIMPFKIIAADNGDAWVESRGNKMAPPQVSAEILKKMKKT 125

Query: 141 ATATLGGELAGVVITVPAYFDDAQRVATKDAAALAGLHVLRLLNEPTAAAIAYGLDSGQ- 199
           A   LG E+   VITVPAYF+D+QR ATKDA  +AGL V R++NEPTAAA+AYG+D  Q 
Sbjct: 126 AEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQG 185

Query: 200 EGVIAVYDLGGGTFDISILRLSRG----VFEVLATGGDSALGGDDFDHLIADHLQAQ--- 252
           + ++AVYDLGGGTFDISI+ +        FEVLAT GD+ LGG+DFD+ + ++L  +   
Sbjct: 186 DNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKK 245

Query: 253 ---IGLTSLTAEQQRALINAATQAKIDLTEYMTAELNVLGWQGS----------LTREEL 299
              + L       QR L  AA +AKI+L+     E+N+                +TR +L
Sbjct: 246 EQGLDLRKDPLAMQR-LKEAAEKAKIELSSTNQTEVNLPYITADATGPKHLVVKITRAKL 304

Query: 300 ENLIAPLLKKTLLSCRRALKDAGVEADEVLEVVMVGGSTRTPFVREQVGEFFGRTPLTSI 359
           E+L+  L+ +TL   + AL DA +   ++ EV++VGG TR P V+E V  FFG+ P   +
Sbjct: 305 ESLVEDLIIRTLEPLKVALADADLSVSDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDV 364

Query: 360 NPDEVVAIGAAIQADILAGNKPDAEMLLLDVIPLSLGIETMGGLVEKIIPRNTTIPVARA 419
           NPDE VA+GAAIQA +L+G+  D  +LLLDV PLSLGIETMG ++ K+I +NTTIP    
Sbjct: 365 NPDEAVAVGAAIQAGVLSGDVKD--VLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTKAQ 422

Query: 420 QEFTTFKDGQTAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGL 479
           Q F+T  D Q+A+++HV+QGER+     +SL +F+L GI P   G   I V + +DADG+
Sbjct: 423 QVFSTADDNQSAVTIHVLQGERKQASANKSLGQFNLDGIEPAPRGMPQIEVMFDIDADGI 482

Query: 480 LSVTALEKSTGVQAEIQVKPSYGLSDDEVTQMLKDSMAYAKEDMLARALAEQRVEADRVI 539
           L V+A +K TG +  I +K S GLS++EV QM++D+ A+A+ED     L + R +AD ++
Sbjct: 483 LHVSATDKKTGKKQNITIKASSGLSEEEVAQMVRDAEAHAEEDKKFEELVQSRNQADGLV 542

Query: 540 EGLVSALQADGDELLNEQER--QTLLQAIERLIELRNGDNADAIEQGIKDTDKAS 592
                 ++  GD L +E +   +  + A+E  ++   G++ +AIE+  +   +AS
Sbjct: 543 HATKKQVEEAGDALPSEDKAKIEAAMSAVETAVK---GNDKEAIEKATQALIEAS 594