Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., RNA methyltransferase from Pseudomonas fluorescens FW300-N2C3

 Score =  252 bits (643), Expect = 6e-72
 Identities = 129/246 (52%), Positives = 176/246 (71%), Gaps = 8/246 (3%)

Query: 2   MLERVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNA 61
           +L+ ++VVLV T+H GNIG AARAMK MGLS++VLV+P+     +A A A+GA +I  NA
Sbjct: 1   LLQNIRVVLVNTSHPGNIGGAARAMKNMGLSRLVLVEPRLFPHHEADARASGAGDILANA 60

Query: 62  QIYPTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQ-HSVAMVFGRERTG 120
           Q+  TLE A+  C LV+GTSAR R + WP+L+PRECG K++ EA Q   +A+VFGRE +G
Sbjct: 61  QVVATLEDALVGCNLVLGTSARDRRIPWPLLDPRECGTKVVEEAAQGFEIALVFGREDSG 120

Query: 121 LTNDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLA-------LQQSSQSSTL 173
           LTNDELQ CH+HV +P++PE+SSLNL  AVQ+LSYEVRMA+LA       ++++  +S  
Sbjct: 121 LTNDELQRCHFHVHIPSDPEFSSLNLGAAVQVLSYEVRMAWLAAEGKPSKVEKTEVTSPR 180

Query: 174 QEEYPRHQELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGIL 233
            E      ELERFY HLEQ ++  EF+  ++P  +M +LRR++ R+     E+NILRGIL
Sbjct: 181 SETLATMDELERFYEHLEQTLVDIEFLDPEKPRHLMARLRRLYGRSSVSRAEMNILRGIL 240

Query: 234 TSVQKS 239
           T  QK+
Sbjct: 241 TETQKA 246