Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., tRNA:Cm32/Um32 methyltransferase from Xanthomonas campestris pv. campestris strain 8004

 Score =  199 bits (505), Expect = 6e-56
 Identities = 110/244 (45%), Positives = 154/244 (63%), Gaps = 9/244 (3%)

Query: 4   ERVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNAQI 63
           +R++ VLVGT H GNIG+AARAMK MGL+++VLV P+  +D  A   +AGA ++  +A I
Sbjct: 5   QRIRFVLVGTQHPGNIGAAARAMKTMGLTRLVLVAPEKALDEDAYRRSAGAEDVLSDAPI 64

Query: 64  YPTLEAAVADCGLVVGTSARSRTLEWPMLEPR-ECGEKLISEANQHSVAMVFGRERTGLT 122
           + TL  AVADC LV+G +AR+R +    L P    G      A    VA+VFGRERTGLT
Sbjct: 65  FETLAEAVADCTLVIGCTARARRVALEELAPDVGAGRAWAKAAEPAEVAIVFGRERTGLT 124

Query: 123 NDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQ--------QSSQSSTLQ 174
           NDELQLCH  V +P++P++SSLNLA AVQ+L+YE+R+A LA +         ++ S+  +
Sbjct: 125 NDELQLCHAAVHIPSDPQFSSLNLASAVQVLAYEMRLAQLAAEATPAAPAAPAADSAGPR 184

Query: 175 EEYPRHQELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGILT 234
           E    H ++E  +  L Q + + +F   + P   M KLRR+  RA    QE+ +LRGIL 
Sbjct: 185 ELPASHAQMEGLFGQLGQTLDEIDFHKGRAPDSAMRKLRRLLLRAEMTEQEVRLLRGILA 244

Query: 235 SVQK 238
             Q+
Sbjct: 245 DAQR 248