Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., RNA methyltransferase TrmH, group 1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 1e-33
 Identities = 94/234 (40%), Positives = 130/234 (55%), Gaps = 6/234 (2%)

Query: 8   VVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQ-AIALAAGASEIALNAQIYPT 66
           +VLV    + NIG  ARAM   GL+ + LV P+    A+ AIA A+GA  +   A+ + T
Sbjct: 20  IVLVRPQLAENIGMVARAMLNCGLTALRLVAPREDWLAEKAIASASGADGLLREARFFET 79

Query: 67  LEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISE-ANQHSVAMVFGRERTGLTNDE 125
            EAA+AD   V  T+AR R +   +L PR   E+L ++ A     A++FG ERTGL+ND+
Sbjct: 80  TEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSNDD 139

Query: 126 LQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQELER 185
           + L    V VP NP Y SLNLA AV LL YE   A  A   + Q  T   +     EL  
Sbjct: 140 VALADAIVEVPLNPAYCSLNLAQAVLLLGYEWYQAGDA-TPAEQLVTNDTQPATRGELLG 198

Query: 186 FYAHLEQVIMQTEFI--SAQQPGQVMNKLRRMFTRARPEAQEINILRGILTSVQ 237
           F+ HLE+ +    F+  +A++PG V N LR +F RA    QEI  L G++  ++
Sbjct: 199 FFDHLERELDDCGFLRNAAKRPGMVRN-LRNLFERADLTEQEIRTLHGVVKELR 251