Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., TrmJ/YjtD family RNA methyltransferase from Rhodopseudomonas palustris CGA009

 Score =  113 bits (282), Expect = 7e-30
 Identities = 76/234 (32%), Positives = 126/234 (53%), Gaps = 8/234 (3%)

Query: 8   VVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQ-VDAQAIALAAGASEIALNAQIYPT 66
           V+LV      NIG  ARAM   GL+++ LV P+    +  A   AAGA  I    +++ +
Sbjct: 20  VILVEPQLGENIGMCARAMGNFGLTRLRLVKPRDGWPNIAAQRSAAGADHILNAVELFDS 79

Query: 67  LEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISE-ANQHSVAMVFGRERTGLTNDE 125
           +  AV DC L+  T+AR+     P+  P    ++++ E A+  +  ++FGRER GL NDE
Sbjct: 80  VAEAVKDCTLLFATTARAHDQAKPVRGPEAAAQEIVVETASGGTTGIMFGRERHGLENDE 139

Query: 126 LQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPR--HQEL 183
           + L +  V  P NP ++SLNLA AV L+ YE    +    Q++    + E  PR    ++
Sbjct: 140 VALANRIVTFPVNPAFASLNLAQAVLLMGYE---WFKHATQNALPYEMPERSPRASQHQI 196

Query: 184 ERFYAHLEQVIMQTEFISAQQPGQVM-NKLRRMFTRARPEAQEINILRGILTSV 236
           + F+++L   + + EF+   +    M   LR +FTR  P  Q+++ L G++ ++
Sbjct: 197 DAFFSNLVAELDRVEFLRPPEKRDTMLVNLRNIFTRMEPSKQDMHTLHGVVMAI 250