Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ from Phaeobacter inhibens DSM 17395

 Score =  102 bits (255), Expect = 5e-27
 Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 6/229 (2%)

Query: 9   VLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQ-VDAQAIALAAGASEIALNAQIYPTL 67
           VLV      N+G+AARAM   GL +M +V P+    + +A+A+A+GA  +   A++   L
Sbjct: 11  VLVRPQMGENVGAAARAMWNFGLDRMRIVAPRDGWPNPKAVAMASGAGRLLDEARLAEDL 70

Query: 68  EAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISE--ANQHSVAMVFGRERTGLTNDE 125
             A+ DC  V  T+AR R L  P+  P E   KL +E  A    VA++FG ER GL N++
Sbjct: 71  AGAIEDCDFVFATTARPRELTKPVYSP-EAAMKLAAEKIAAGEKVAVMFGPERAGLENED 129

Query: 126 LQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQELER 185
           +   +  + VP NPE++SLNL   V L +YE R     +     +   + ++  H +++ 
Sbjct: 130 IARANAIISVPVNPEFASLNLGQCVLLTAYEWRRQVTEV-APVVTDLGKSDWASHADVDA 188

Query: 186 FYAHLEQVIMQTEFISAQQPGQVMNKL-RRMFTRARPEAQEINILRGIL 233
              H E  +    F         M  + R MF+R      ++ +L GI+
Sbjct: 189 LVNHYEDRLDDAGFFFPPDKAPSMKTVFRNMFSRMPLTRADVQMLHGIM 237