Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., RNA methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  280 bits (717), Expect = 1e-80
 Identities = 141/239 (58%), Positives = 178/239 (74%), Gaps = 3/239 (1%)

Query: 2   MLERVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNA 61
           ML  ++VVLVGTTH GNIGS ARAMK MGLS + L +P+   D Q++ALAAGAS+I  +A
Sbjct: 1   MLSNIRVVLVGTTHPGNIGSTARAMKTMGLSTLYLAEPKVAPDGQSVALAAGASDILKHA 60

Query: 62  QIYPTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHSVAMVFGRERTGL 121
                LE A+ADC LV+ TSARSRTL+WPML+PR+ GEKL   A    VA+VFGRE  GL
Sbjct: 61  VTVDCLEDAIADCSLVIATSARSRTLDWPMLDPRQAGEKLAGAAVNGPVAIVFGRESNGL 120

Query: 122 TNDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQ 181
           +NDELQ C+YHV +PANPEY+SLNLA AVQ++ YE R+A+LA+   +     ++ YP  +
Sbjct: 121 SNDELQKCNYHVTIPANPEYTSLNLAQAVQIICYEARVAHLAMDPETVE---EQAYPLAK 177

Query: 182 ELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGILTSVQKSI 240
           E E F+ HLE+ ++ T FI  Q PGQVM KLRR+F+RAR E+QE+NILRGILTSV K +
Sbjct: 178 EQENFFVHLEKTLLSTGFIIKQHPGQVMTKLRRLFSRARIESQEMNILRGILTSVDKKV 236