Pairwise Alignments

Query, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (750), Expect = 2e-84
 Identities = 146/243 (60%), Positives = 184/243 (75%), Gaps = 3/243 (1%)

Query: 2   MLERVKVVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNA 61
           ML  ++V+LVGT+H GNIGS ARAMK MGLS + L +P+C+VD Q+IALAAGAS+I  + 
Sbjct: 1   MLSNIRVILVGTSHPGNIGSTARAMKTMGLSTLYLAEPRCEVDGQSIALAAGASDILKHL 60

Query: 62  QIYPTLEAAVADCGLVVGTSARSRTLEWPMLEPRECGEKLISEANQHSVAMVFGRERTGL 121
               +L+ A+ADC LV+ TSARSRTL+WPMLEPRE G+KL++E     VA+VFGRE  GL
Sbjct: 61  VKVDSLQEAIADCSLVIATSARSRTLDWPMLEPREAGQKLVTEGITGPVAIVFGRENHGL 120

Query: 122 TNDELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEVRMAYLALQQSSQSSTLQEEYPRHQ 181
           TN+ELQ C YHV +PANPEYSSLNLA AVQ++ YE R+A+LA  ++ Q+    EEYP   
Sbjct: 121 TNEELQQCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQMEAPQA---VEEYPLSA 177

Query: 182 ELERFYAHLEQVIMQTEFISAQQPGQVMNKLRRMFTRARPEAQEINILRGILTSVQKSIS 241
           +LERF+ HLE  +  T FI    PGQVM KLRRMF+RAR E+QE+NILRGILTS+ K + 
Sbjct: 178 DLERFFVHLESTLSSTGFIIKNHPGQVMTKLRRMFSRARIESQEMNILRGILTSIDKVVG 237

Query: 242 RKE 244
            K+
Sbjct: 238 NKQ 240