Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., Protein-export membrane protein SecD (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 61.2 bits (147), Expect = 6e-14
 Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 3/162 (1%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           +GP++G +    G  A L  +L + L++   + +     A +ALA ++++ L + S+L  
Sbjct: 449 IGPSLGADNITKGIDASLWGMLFVSLFIIAIYRF-FGIIATVALAVNMVMLLALMSLLGA 507

Query: 187 EVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSG 246
            + L  +A ++  +G +++  +++F RIRE        + A  +N    +  +  L  + 
Sbjct: 508 TLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMTIQRA--INEGFGRAFTAILDANL 565

Query: 247 TTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           TTL V   LF  G   + GFA+ + LGI    +++I V  A+
Sbjct: 566 TTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAIMVTRAM 607