Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Protein-export membrane protein SecF (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  285 bits (730), Expect = 7e-82
 Identities = 143/308 (46%), Positives = 216/308 (70%), Gaps = 7/308 (2%)

Query: 9   KMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSA 68
           + I+FM     AF ++L +   ++F+ +TK LN+GLDFTGGTLIE+ +E+PA++ ++R  
Sbjct: 3   RTINFMGVRNVAFGVTLFLTVLALFSWATKGLNYGLDFTGGTLIELTYERPADVTKVREQ 62

Query: 69  LEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGN-VEMRRIEFV 127
           L   G+ DA VQ+FG+  D++VR+   D      LG+Q+  A+++  G N  +++R+EFV
Sbjct: 63  LATSGYSDAIVQSFGATTDLLVRMPGEDPQ----LGHQVAEALQKAGGDNPAQVKRVEFV 118

Query: 128 GPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIE 187
           GP VG+EL + GGL +L++L  IL+Y++ RF+W+ A GA+++L HDVI+T+GI S  QI 
Sbjct: 119 GPQVGEELRDQGGLGMLMALGGILIYLAFRFQWKFAVGAIVSLIHDVIVTVGILSFFQIT 178

Query: 188 VDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGT 247
            DLT++AA+L ++GYSLNDTIVVFDR+RENFR +RK    E +N S TQTL RT+ TS +
Sbjct: 179 FDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVLRKASLIENINISTTQTLLRTMATSIS 238

Query: 248 TLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKE 307
           TL  + AL   GG  + GF++AL +G+  GTYSSIY+A+ + + L ++ E L+PP   + 
Sbjct: 239 TLLAIAALLIFGGDNLFGFSIALFVGVLAGTYSSIYIANVVLIWLNLSTEDLIPPAATE- 297

Query: 308 GAELDEMP 315
             E+D+ P
Sbjct: 298 -TEVDDRP 304