Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

 Score =  307 bits (787), Expect = 2e-88
 Identities = 164/308 (53%), Positives = 222/308 (72%), Gaps = 8/308 (2%)

Query: 9   KMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSA 68
           ++I+FM     AFAL++++  AS+ +L  K LN+GLDFTGGTLIE+G+E+P  LEQ+R  
Sbjct: 3   RVINFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIELGYERPVELEQVRGQ 62

Query: 69  LEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGN-VEMRRIEFV 127
           L   GF DA VQ+FG+  DV+VR+ P DD     LG ++ +A++    GN V ++R+EFV
Sbjct: 63  LVQAGFADAVVQSFGATTDVLVRM-PGDD---PQLGERVASALRNADSGNSVSVKRVEFV 118

Query: 128 GPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIE 187
           GP VG+EL + GGL +L++L  IL+YV+ RF+W+   GAVL+L HDVI+ LG+FS  QI 
Sbjct: 119 GPAVGEELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFSFFQIS 178

Query: 188 VDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGT 247
            DLT++AA+L V+GYSLNDTIV+FDRIRENFR +RK E  E +N S TQTL RT+ TS +
Sbjct: 179 FDLTVLAAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTVATSVS 238

Query: 248 TLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKE 307
           TL  V AL   GG  + GF+LALL+G+  GTYSS+YVA  L + L +TR+ L+PP VE+ 
Sbjct: 239 TLLAVGALMVFGGENLWGFSLALLIGVGAGTYSSVYVAGMLLVWLKLTRDDLIPPVVEE- 297

Query: 308 GAELDEMP 315
             E+DE P
Sbjct: 298 --EVDERP 303