Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 844 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  193 bits (490), Expect = 1e-53
 Identities = 101/282 (35%), Positives = 162/282 (57%), Gaps = 3/282 (1%)

Query: 13  FMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSALEAK 72
           FM+    A   S  +  +S+    T  LN+G+DF GG  +E   ++  NL  +R +LE  
Sbjct: 542 FMKGRFLAIGFSAFLSISSVILFFTPGLNYGIDFIGGIQVEAVSKEKINLPTLRQSLEEL 601

Query: 73  GFGDATVQNFGSARDVMVRLR--PRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVGPN 130
             G+  +Q+FG  + V++R++  P  + A     N++  A+     G   M R E VGP 
Sbjct: 602 NLGEVALQDFGGGQSVLIRVQRQPGGEQAQTVALNKVKDAVTTAIPG-ASMERTEVVGPT 660

Query: 131 VGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIEVDL 190
           V  EL  +G LA+ +++L ILLY+  RFEW  A GA+  L  D+  T+G F++  I+ +L
Sbjct: 661 VSGELARSGFLAVALAMLAILLYIWFRFEWHFAVGAIAVLLLDITKTVGFFALTGIDFNL 720

Query: 191 TIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTTLF 250
           T +AALLT++GYS+ND +VV+DR+REN RK +    +++++ SI Q ++R + TS  T  
Sbjct: 721 TAIAALLTMIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDMSINQVIARCIFTSAATAL 780

Query: 251 VVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKL 292
            ++ +   GG  +  FA  ++ G+ V T SSIY+   + L L
Sbjct: 781 SLVPMAIWGGEAVQSFAWPMIFGVIVATTSSIYIGGPILLFL 822



 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 25/266 (9%)

Query: 53  EVGFEQPANLEQIR---SALEAKGFGDATVQNFGSARDVMVR-------------LRPRD 96
           +VGF+Q  N   +     +L A+ F D T +N G    +++              L  R 
Sbjct: 260 KVGFDQRTNQPVVDFSFDSLGARQFADITRENVGRPFAIVLDGKVLTAPVINEPILGGRG 319

Query: 97  DMAGEALGNQ--ILAAIKEGTGGNVEMRRIE--FVGPNVGDELTEAGGLAILVSL-LCIL 151
            ++G     +  +L+A+         +  IE   VGPN+G +    G    L    L ++
Sbjct: 320 QISGSFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGSDSIRMGLFTGLAGFGLVVV 379

Query: 152 LYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVF 211
           L V +   W + A   L L    I+T+G+  ++   + L  +A ++  +G +++  I++ 
Sbjct: 380 LMVVLYGAWGMIANVGLVL--HTIMTIGVLGLIGSTLTLPGIAGIILGIGMAVDANILIN 437

Query: 212 DRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTTLFVVIALFTQGGAMIHGFALALL 271
            RIRE          A  ++    +  +  + ++ TTL   + LF  G   + GFA+ ++
Sbjct: 438 ARIREETEAGAGAMKA--LDIGFNKAYATIIDSNVTTLAGTVLLFWFGSGPVKGFAVTMM 495

Query: 272 LGITVGTYSSIYVASALALKLGITRE 297
           LGI +  ++S+ V   L  ++ + R+
Sbjct: 496 LGIGISMFTSVTVVRLLMREVVVRRK 521