Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  204 bits (518), Expect = 8e-57
 Identities = 122/309 (39%), Positives = 185/309 (59%), Gaps = 14/309 (4%)

Query: 13  FMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQP-ANLEQIRSALEA 71
           FM      F L   +  AS+  L++  LN G DF GG++IE+      A+   IR+ L+ 
Sbjct: 551 FMAIRNPVFILMTALSLASLVLLTSLGLNMGADFRGGSVIELRARTGVADGADIRARLDE 610

Query: 72  KGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVGPNV 131
              GD  V+  GSARDV+VR+  ++  AG+      +  ++         RR+E VGP V
Sbjct: 611 LNLGDVQVEELGSARDVLVRIPSQE--AGDNAEQTAVGLVRSELEDQYVFRRVEVVGPGV 668

Query: 132 GDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIEVDLT 191
             ELT AG LA+  ++L +LLYV +RF  R A GA++A  HDV++TLG   +  IE +L 
Sbjct: 669 SGELTRAGSLAVAAAVLAVLLYVWLRFGRRFAVGAIVATLHDVLLTLGFLVLTGIEFNLA 728

Query: 192 IVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTTLFV 251
            +AALLT+V YSL+DT+V++DR+REN  + R+   + ++++SI QTLSRT++T+ TTL  
Sbjct: 729 SIAALLTIVCYSLSDTMVIYDRVRENLVRYRRMPLSVLIDTSINQTLSRTVLTAVTTLLA 788

Query: 252 VIALFTQGGA-MIHGFALALLLGITVGTYSSIYVASALAL-------KLGITREHLLP-- 301
           ++AL+  GG+ ++  F+  L+ G+ VGT SSIYVA  L +       +LG T++   P  
Sbjct: 789 LVALYLFGGSGLVQSFSATLIFGVLVGTVSSIYVAGPLLILFNRRNNRLGGTQDPAEPDA 848

Query: 302 -PQVEKEGA 309
             + E +GA
Sbjct: 849 SSETEAKGA 857