Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., protein-export membrane protein SecD (RefSeq) from Shewanella amazonensis SB2B

 Score = 62.0 bits (149), Expect = 4e-14
 Identities = 42/169 (24%), Positives = 90/169 (53%), Gaps = 6/169 (3%)

Query: 119 VEMRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITL 178
           V +++   +GP++G E    G  A+ + +   LL++++ +  RL   A +AL  ++++ L
Sbjct: 429 VTIQKERTIGPSLGAENIHNGFAALALGMGATLLFMALWYR-RLGWVANVALLANLVMLL 487

Query: 179 GIFSILQIEVDLTI--VAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQ 236
           G+ +++   V LT+  +A L+  VG +++  +++F+RIR+  ++ R    A  ++     
Sbjct: 488 GLLALIPGAV-LTLPGIAGLVLTVGMAVDTNVLIFERIRDKMKEGRSLALA--IDKGFAS 544

Query: 237 TLSRTLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVA 285
                +  + TT+   + L+  G   I GFAL L LG+     + I+++
Sbjct: 545 AFGTIVDANLTTMITALVLYAIGNGPIQGFALTLGLGLVTSMITGIFMS 593