Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., protein-export membrane protein SecF (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (556), Expect = 1e-61
 Identities = 120/290 (41%), Positives = 181/290 (62%), Gaps = 5/290 (1%)

Query: 9   KMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSA 68
           K ++F R+      +S+V +  S+  +ST+  N GLDFTGG   EV       ++++ +A
Sbjct: 2   KTLNFTRFRHLMTLISVVALLLSVLAISTRGFNLGLDFTGGAFAEVAMATDTRIDEVETA 61

Query: 69  LEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVG 128
           L   G G  +V      R  ++R+    D    A  NQ L  +       +++   + V 
Sbjct: 62  LAHLGDGSISVVATEPGR-FLIRMGGTLDAHTLADFNQSLLQLDP----TMQVLDRDSVS 116

Query: 129 PNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQIEV 188
           P VG EL E GGLA+L+++LCIL Y+S+RFEWRLAAGA++AL HDV++ LG+F++  +E 
Sbjct: 117 PQVGQELFEQGGLALLIAMLCILGYLSLRFEWRLAAGALVALVHDVVLVLGVFALTGMEF 176

Query: 189 DLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTT 248
           +LT++AA+L V+GYSLND+I++ DRIRE      K    E+ +++I QT SRT++TSGTT
Sbjct: 177 NLTVLAAVLAVLGYSLNDSIIIADRIRELLLARPKSRLTEVNDAAIVQTFSRTMVTSGTT 236

Query: 249 LFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREH 298
           L  V AL+  GGA + GFA+A+ +GI  GT+SS+ V + L   LG++  H
Sbjct: 237 LITVGALWLLGGAPLEGFAVAMFVGIVTGTFSSVSVGTVLPELLGLSPAH 286