Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., preprotein translocase subunit SecD (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 45/166 (27%), Positives = 89/166 (53%), Gaps = 10/166 (6%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAV--LALAHDVIITLGIFSIL 184
           +GP++G E  E G  A++  ++ +L ++ V +    A G +  LAL  ++I+ +G+ S++
Sbjct: 442 IGPSLGAENIENGLQAMIWGMVVVLAFMLVYYR---AFGVIANLALCANLIMVVGVMSMI 498

Query: 185 QIEVDLTI--VAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTL 242
              V LT+  +A ++  VG +++  +++++RIRE  R  R  + A  ++      LS   
Sbjct: 499 PGAV-LTLPGIAGMVLTVGMAVDGNVLIYERIREELRAGRSVQQA--IHEGYGNALSTIA 555

Query: 243 ITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
             + TT    + LF  G   + GFA+ L++GI    +++I    A+
Sbjct: 556 DANITTFLTALILFAVGTGAVKGFAVTLMIGIATSMFTAIVGTRAI 601