Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., protein-export membrane protein SecD from Phaeobacter inhibens DSM 17395

 Score = 80.5 bits (197), Expect = 9e-20
 Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 26/238 (10%)

Query: 71  AKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAA---------IKEGTGGNVEM 121
           A+ FGD T +N GS   +++     + ++   + + I            I+E T   + +
Sbjct: 307 ARKFGDYTAENIGSPFAIVL---DEEVVSAPVIQSHIPGGSGIITGNFTIEESTNMAILL 363

Query: 122 RR------IEF-----VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLAL 170
           R       +EF     +GP +G +  +AG +A +V+ + +L+++++ +       A +AL
Sbjct: 364 RAGALPAGLEFLEERTIGPELGQDSIDAGKVATIVAFVGVLVFMALSYGL-FGVFANIAL 422

Query: 171 AHDVIITLGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIM 230
             ++ +  G  S++   + L  +A ++  VG +++  +++F+RIRE  +  R   PA  +
Sbjct: 423 ILNIALIFGALSLIGATLTLPGIAGIVLTVGMAVDANVLIFERIREELKAGRG--PARAI 480

Query: 231 NSSITQTLSRTLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           +   ++ LS  L  + TT    + LF  G   + GFA+ L LGI    +++I+V   +
Sbjct: 481 DEGYSKALSAILDANITTFITAVILFAMGSGPVRGFAITLGLGIMTSVFTAIFVTRVI 538