Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., preprotein translocase subunit SecD (RefSeq) from Shewanella loihica PV-4

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 40/158 (25%), Positives = 84/158 (53%), Gaps = 6/158 (3%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           +GP++G E  + G  A++  +  +L+++ V +       A LAL  ++++ +G+ S++  
Sbjct: 442 IGPSLGAENIDNGLQAMIWGMAVVLIFMLVYYRG-FGLIANLALTANLVMVVGVMSMIPG 500

Query: 187 EVDLTI--VAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLIT 244
            V LT+  +A ++  VG +++  +++++RIRE  R  R  + A  ++       S     
Sbjct: 501 AV-LTLPGIAGMVLTVGMAVDGNVLIYERIREELRAGRSVQQA--IHEGYGNAFSTIADA 557

Query: 245 SGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSI 282
           + TT    + LF  G   + GFA+ L++GI    +++I
Sbjct: 558 NITTFMTALILFAVGTGAVKGFAVTLMIGIATSMFTAI 595