Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., protein-export membrane protein, SecD/SecF family from Dechlorosoma suillum PS

 Score =  268 bits (686), Expect = 1e-76
 Identities = 138/313 (44%), Positives = 207/313 (66%), Gaps = 7/313 (2%)

Query: 3   QILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANL 62
           +  K  K I FMR +     +SLV    ++F L+T+ L+  ++FTGGTLIEV + Q A+L
Sbjct: 2   EFFKIRKDIPFMRHALVFNVISLVTFLLAVFFLATRGLHLSVEFTGGTLIEVSYSQAADL 61

Query: 63  EQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMR 122
           E+IR AL   GF D +VQNFGS++DV++RL  + +     LG  ++AA+      +  +R
Sbjct: 62  EKIRGALGKSGFSDYSVQNFGSSQDVLIRLPLKSEQNTAKLGESVMAALS-AEDASASLR 120

Query: 123 RIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFS 182
           R+EFVGP VG EL E G +A+LV ++ I++Y++ RFEWR +  A++A  HDVII LG F+
Sbjct: 121 RVEFVGPQVGKELAENGAMALLVVIIGIVIYLAFRFEWRFSVSAIIANLHDVIIILGFFA 180

Query: 183 ILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTL 242
             Q E  L+++AA+L V+GYS+N+++VVFDR+RE FRK R     ++++ +IT T+SRT+
Sbjct: 181 FFQWEFSLSVLAAVLAVLGYSVNESVVVFDRVRETFRKARGMTTPQVLDHAITSTISRTI 240

Query: 243 ITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLL-- 300
           IT G+T  +V+++   GG  +H FA+AL +GI  G YSS+ VAS L + LG++RE  +  
Sbjct: 241 ITHGSTQMMVLSMLVFGGETLHYFAMALTIGILFGIYSSVLVASPLVMWLGVSREQFIKA 300

Query: 301 ----PPQVEKEGA 309
                P V  +GA
Sbjct: 301 PKAKDPNVSDDGA 313