Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., preprotein translocase subunit SecD (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 11/163 (6%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           VGP++G E  + G LA +V    +++++ V +        V+ L   V++ L   +    
Sbjct: 359 VGPSLGQESIDKGILAAVVGGAAVMIFMVVYYGVSGLIADVM-LCFTVLLILAGMAAFGA 417

Query: 187 EVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR-TLITS 245
            + L  +A ++  +G +++  +++++RIRE  RK         + S+I +   R TL  +
Sbjct: 418 TLTLPGLAGIVLTLGMAVDANVLIYERIREELRK------GHTVLSAIHEGFDRATLAIT 471

Query: 246 GTTLFVVIA---LFTQGGAMIHGFALALLLGITVGTYSSIYVA 285
            + L  +IA   L+  G   + GFA+ L LGI    +++I+V+
Sbjct: 472 DSNLTTIIASAILYQFGTGPVRGFAVTLSLGIIASMFTAIFVS 514