Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis JJ

 Score = 63.5 bits (153), Expect = 5e-15
 Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 18/274 (6%)

Query: 23  LSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPANLEQIRSALEAKGFGDATVQNF 82
           + +++   S+  +S   L   +D +GGT  E+    PAN +   S L+ +   D+ V+  
Sbjct: 11  IPIILALLSLTLVSVNGLKESIDVSGGT--EISILAPANTDL--SVLKEQ-LPDSEVKIS 65

Query: 83  GSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVEMRRIEFVGPNVGDELT----EA 138
            S+    V ++     +G       + A+ +G     ++  + +    +G  L+    E 
Sbjct: 66  ESSIGTFVVIK-----SGLETDVDSVRAVVKGFFNVQDLSELSYTEKQIGSVLSSKFWEE 120

Query: 139 GGLAILVSLLCILLYVSVRFEWRLAAGAV-LALAHDVIITLGIFSILQIEVDLTIVAALL 197
           G  A+  + + + + V   F   + + AV LA A D+ I LG  S+  I +    +AALL
Sbjct: 121 GMKAVGFAFIFMAIVVYAIFRTPVPSAAVILAAASDMAIALGGMSLFNIPISTATIAALL 180

Query: 198 TVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTTLFVVIALFT 257
            +VGYS++  I++  R+ +       E  A  M + IT +L  T I +   L++V+    
Sbjct: 181 MLVGYSVDTDIMLTTRVLKRRSGTLDERIAGAMKTGITMSL--TTIFAMAVLYLVVTFVV 238

Query: 258 QGGAMIHGFALALLLGITVGTYSSIYVASALALK 291
               ++   A  LL+G+ +G     ++ +A  LK
Sbjct: 239 PAADVLANIAAVLLIGL-IGDLMLTWMTNAGILK 271