Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., protein-export membrane protein SecD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 3/162 (1%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           VGP++G E  ++G LA  V    ++++ ++ +     A AV  L   +++ L   +    
Sbjct: 359 VGPSLGQESIDSGILAGQVGGAAVVVF-TILYYGASGAIAVGMLCFTILLILAGMAGFGA 417

Query: 187 EVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSG 246
            + L  +A +   +G  ++  +++++RIRE  R  R   P   +++   + +     ++ 
Sbjct: 418 TLTLPGLAGIALTIGMGVDANVLIYERIREELR--RGLTPLAAIHAGFDRAMLSITDSNL 475

Query: 247 TTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           TT+     L+  G   + GFA+ L LGI    +++I+V+ A+
Sbjct: 476 TTVIAAAILYQFGTGPVRGFAVTLTLGILASMFTAIFVSRAV 517